Gene detail

Detail information of GWHGAAEX002675/evm.TU.scaffold_122.35

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG1810	Cell cycle-associated protein
nr	gi\|672108277\|ref\|XP_008784315.1\|	PREDICTED: thyroid adenoma-associated protein homolog [Phoenix dactylifera]
trEMBL	tr\|M0SG70\|M0SG70_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P20040_001}
TAIR	AT3G55160	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000123	1766846	1793226	+

Transcript Sequence
>GWHTAAEX002675 ATTTTCGCTTCCGTTTTTTCAATTTTCCTCCTAACCCTAACCAATTTTGCAAGGGTTTATAAACCGCCAGTCACCGGAGTTTTCTCCTACGCCTTCCCGCCGTGGGAAAAACTCCCAGATTTGAAAAGAGGAAAAAACATACCTGCCTCAATTATCAAAGCCACAACCTGTATAAAGAGCGACTTTCCAAATCACATCTAGTTAGAAGCTCAATTTTTAGTACTCCGGTGCTAACATTCTGCAAAACGATGTCGGCTAAATGGCGAGCCATGCAGCACAAGCATCGTTACACCTACAATTCGGTGGTATTTCCTAAAGCCTACATTGAAACTCTCAGTCTCATTTCCCCCGAAACTTTCTCTTTTTTTGATTTCTTCTCTAAACTGCGAGATTTCATCTCCTTGAACTCTACTTACTCTCAAATCTCTGCCGTAAAAGACCTATCTTCATCGTTTGCCCAATTGCTGAACTCGCTATCTTTACAGGAAAGTTTGACTCTCACAGCCATTCGATTTTATGTGGAAATACTATTTCTCGAGAATTCCCTCCCTCTCCATCGAACCCTAATCTCCCCTCTCACCAAGAATAAAAAGTTTCTTTCAGTGATCTGTAGCTGTTTTGTTGCTCTTTGCAAGGAGCATACCGGTTTAGGCAATAGTGTGGCGAAGAGGTTTTTGGTTCCCCGAGCTGTTTTATCTTTGTTGGGTTACCCCAAATTGGGGTTCTTAAATGAAGCAGTGGAGAAATGTTCCGTCTTGGTGGTAAGCGATATTGTTTCTGGTTTTTCCAGCGTGATTTTTGATGTTAATCTTGGCTTTAGGCCTTCCCCTCTGGCGACGGAGCAGTGCCAGGATGCCTTGTCTTGCTTGTACTACTTGCTTCAAAGGTTTCCTCAAAGCATATCAGCCTTAGAAAATGGTTTCTGCGCCCCTGAAGAAATTATTGGTGTTATATTGCGTGTTTTAAAGTCGTCGGCATTTTCACGGGATTGCTTAGTAGCTGCAGGTGTGAGCTTTTGTGCTGCAATTCAGGCTCGTATAAGAGCCCAGGATGTCTCACAGTTTCTATCAAAAGCAGTCTTTGACTTATCTTGCGGAGATGGAGATATCTTGGAGATAGCTGGAAACTTGTGCTTAGAGATAAGGGACTTATCAATTTTGAGCCGGCTTTGCTTGCTGAGAGGTATACTGACTGCTGTCTCTAGGTCTACACTTAATTTTTTTTTCAAATCAGCCAATGGTGGTATACGGACTCTGCTTTATAATGCAATTTTGCCAGAACTTTGCAAATACTGTGAGAAACCAATTGACAGCCATTTCAATTTTCATGCGTTGACAGTTTTGCAAATTTGTTTGCAACAGATGAAAACATCAATAATGGTGGGTCTAACGGATATTTCAGGGGATTATGATCCCCTTCCTGAGGAAATGACAGGCTGCCTACTTAGGATTATATGGAATAATCTTGAAGATCCTTTGAGTCAAACAGTCAAGCAGGTGCACCTCATATTTGATCTTCTTTTGGATGTCAAGTCATCTCTTCCATCAAAAGATGCTAACGAGAACAACAGAACCTTTTTGTGCAATATTGCTTTAGACCTTCTTCGGTTGGGTGCTCGTTGCAAAGGGAAGTATGCGCCTTTAGCTTCTATTGGAAAACGTTTAGGGTCAAACTCTCTTTTGAAACTGAATCCAAACCTCCTTTCTGAAACAATTTATGGTTATATAGATGATGATGTTTGTTGTGCTATCACATTATTTTTAAAATTCTTTTTTGAATGCCTGCGTGATGAGTGCTGGGGCCTTGAAGGTATTGAAGGAGGATATAAAACTTTCAGAAAAATCTGTCTCCATCCCATAATGCAAGGACTTGTATCTGGAAATTCAAAATTGCGATCAAACTTGAACACCTATGCTCTACCTGTCTTGCTTGAAGTTGATTCAGATAGTATATTTCCAATGCTTTCATTTATATCTGTAGGGCCTTACTTGGAGGATGGAAAATTAAGTGTGGATCTGAAGGTTGATTCATGTGTAGCTGCTCTGGTTTCCTTGCTCAAAGTGTCTCGTACACTTGCTCTTATTGAGGGGGACATTGATGTGGATTCTGACTCATCGAGTGAGCCATGTAACTCCAGAGGTGTTGCTATTGTTTGCTATAAAGGAACTAATGTTAGAATTCCTGTTGACTGGTTAATGCTTGCTTTGACACATGTTGATGAGAGTTTACGGATTGATGCGGCAGAGTCTTTGTTTTTAAATCCCAAGACAGCCAGTCTTCCATCCTCTTTAGAGCTCAAGCTGATGAGAGAGGCTATTCCTTTGAACATGCGGTGCTCTTCAACAGCATTTCAGATGAAATGGACAAGCCTGTTCAGGAAGTTCTTTTCTAGAGTGCGGACAGCTTTGGAGAGGCAGGTGAAACATGGTCGATGGAAGCCTACTACATGTATTGGTGGCAGCCATGATTCAACTTCTGATCTTTTCGGAATTTCTGTGATCCATAGGGCTGAAGATCTTCTTAAGTTCATGAAGTGGTTTAGTAGCTTTCTCTTTTATTCATGTTACCCTTCTGCACCTTATGAGAGGAAAACTATGGCAATGGAACTTATCCTAGTAATGATAGATGTTTGGCCACCAAGGTTGTTGGAAGATAATTATAATCTCTATCCATACAGTAAAGGGTTTACATCGGAAAATTCAACTTTGTTGTTAGTTGGATCTATAATTGATAGTTGGGATAAATTGAGAGAAAATTCTTTCCGCATTCTTCTTTGTTTTCCCACCCCTCTTACGGGTATTTCTTCTTATGACACACTGAACAAGGCAGTTCTTTGGGCAAAAAGACTGGTGTGCAGTCCACGTGTACGAGAGAGTGATGCTGGTGCCTTGACTCTTAGACTAATATTTAAGAAATATGTCATGGATCTCAAGTGGGGGATTGAATGCTTTCTTAAAAGCACTCAAATCTATTCTCAATCAGAACTTATGAATAATGACTCAAGCATGGTCATGCGTGAGAGTCCCCTCGTGGCTTACATAACAGCACTTATTGATTGGTTGCGCATTTTGGTTGAAAATGGTGAAAAGAATCTCTCAGAAGCATGCCATAATAATTTTGTTCATGGGGTGCTACTTACTTTGCGGTATACATTTGAAGAGTTAGATTGGAGTGCCGAAGAAGTAATGTCAAGTAGCAAGGAGATTAGATGCTTGCTTCAGAACCTTCTGGAATTGATTATGAGAGTGACTTCTTTGGCCCTTTGGGTGGTTTCTTCAGATGCATGGTATATGCCCTATGACATGGATGATGTGATTGATGAGGCTAGTTTTGTACCTGATTCCTCAGTTGGGATGGAGTCAGCAGAATCCTCATTAGGACAAGTGAACATCATTGAGAAAGCTAATGATAAAAATGGACCAGCTGATCATACTGTTATGGTTGGCTGTTGGCTAGCAATGAAAGAGGCGAGTCTTCTTTTAGGAACCATAATTAGGAAAGTTCCATTGCCAAGCTGCTCCTTATCTGAATCATCAAAGCATGATTATCTTGTTAAAAATGGCGAAGAAACAGTAGCGCTTGTAACCGAAGAAGGATTACTAAATTCACAGCAGCTTGAATCTATAGGAAGCCATTTCTTGCAAGTTCTATTAAAGATGAAACACAATGGTGCAATCGACAAGACCAGGGCTGGATTCATTGCACTTTGCAATCGTCTTCTTTGCTCAAATAATCCTAGGCTGTGCAAAATGACAGAAACTTGGATGGAGCAACTGATGGAAAGAACAACTGCTAAAGAGCAAACTGTTGATGATTTGTTAAGGAGGAGTGCAGGAATTCCTGCTGCATTTATTGCTTTTTTCCTGTCAGAACCAGAGGAAACACCAAAACTTTTACTCCCAAAAGCATTAAGCTGGTTGATTAGTGTTGCTAAAAGGTCACTGTGCAATGACTCTAAAGCTTATAACCAGAATAATGAAGTTCTACGCAGCAGTTTTGTAAAATATCAGGATGAAGCAAATGGATGTGCCTCTAAGATAAGAGATGAGGGCGTAATACCAACTGTTCATGCATTTAATGTGCTCAGAGCATCTTTCAATGACACAAATTTAGCAGCTGATACTTCTGGTTTCTGTGCCGAGGCATTGATTGTCACAATACGGTCTTTCTCATCTCCTCATTGGGAGGTCCGGAATAGCTCCTGCCTTGCATTTACTGCATTGGTTCGTCGAATGATTGGATATCTTAATGTGCATAAACGAAAATCATCAAGACGGGCATTAACTGGTCTCGAATTCTTCCACAGGTACCCAGCTCTTCATCCATTCTTTTGCAGTGAGCTGGAGATCGCAACAAAACCTCACAGTGATGAATATGCAACAGATGCAGATTTGAACATTGCTAAAGCTGTTCATCCAAGCTTGTGCCCAATACTCGTTCTTCTATCCATGTTAAAGCCATCTCTCATCAGCAGCGGTGCTGATGATCTTTTAGATCCCTTTATGTTAATCCCTTTTATAAGGAGTTGTGGAACCCAAAGCAATTTTCGTGTTCGTGTTCTTGCCGCAAAGGCTTTGATTGGCTTAGTTTCTAATGAGAAACTGCAGGCTGTTATCAACGAGACAGCCCACAGTTTGCCTTGTGAAAGGCAGCCAAGGATGAGGACCAGTTTTTCCTTTAACTTGATACACGGAATTCTATTACAACTGTCTTCTCTTCTTGACAACAATTGCAAGAATTTGACTGACGCTGAGAAGAAAGAAGGAATTCTCAGCGAAGTCTTCCATGCCCTTGTGCAGTGTTCCTGGATTGGAAGCATCAGGTCATGTCCCTGCGCTATGTTAAATAGCTTATATTTGCTAGTTTTGGAGCAAATGAATGGTATTTCATTGTCCTTTTCAAGCAGACATACTGCATCCATTCAAACCCTTTTACTGAAATTAGCAGTTGAATCCTTGAATGAGAAAAATATTTCTTCACCTCCTTTATATGACCCTACAATGGTTGACCTCCGTAAGCAAGCCGCCACATCTTATTTCAATTGCCTTTTTAGCACTGATAAAGAAGCTCCAGATAAATGTTCCGAGCTTTCTAACACTTCTGCCTTTAACCTGAGTAAGACGCCTTCAAATGTTGATGATATTACCATCTCAGAACTTCAGGAGAGGATAGTGTCATGCATCTCAGATTCTATGTATGAAGTTAGAATTATAGCGCTTAAAAAGCTTCTTCAAATCACAAAATGCATTAGTTTTAATGGCAGGCGAAATGATAATAGATCAGACATTTTTATCTGGGTAAAGACTGATTTGCAGGCTGTTCTGATGCAGTTTTTGTCAATGGAAGAGAACCCAAAGTGTATTTATTACATTTTAAAGCTCATCTTCTCTTGTAGTGTTCTACAACCAAATGAATTTGCAGATTGGAATGCAGCATTCTGCTTTTGGGACACATTAGCTTATCTAAAAGACACTGTAAGGCGTATAAAGACTCTAGAAATTTTACTTTGTTGCATGGCTATTTGCACGAAGGCGTTTGCAAAAATGCTCCGGAGGCTTCTTGTAGATGACCAACCCCAGCATCTACAAGAAGAGACTACCAGAGCCTTTAAATACATTAATTCTTTCATTATACTGATTAAACAGCAGAGTGCGCCTTCTCAACCTGTTAGCACGAGGAAAGCTGCAGCAGAAGCCGTTGCAGCATCCGGACTGCTTGAGGAAGCCATTTTTATGGCATCACATGTATCAAACAACTGTATCCTATTTGAATCTGAAAGCCTTATCGAAGAAGAGATCCAAGTATATATGCCAGAGTTTGTCAATCTATATGCTACCAGAATTTTAGACGTGTGGTTTACATGTATTCAGCTCTTGGAGGATGAGGATGCTGCTCTTAGACACATTCTTGCCAAGAATGTTCAGAAATACATTGATTTGAACAGTTTTGGTGTCGCCAGACAAGTTGATCAAGTGATTGAATTAAGTCTCGGGTTCTTATCTAAAATCTTTATCAACTGGTATGGCTTTGTACAATATTTATTGAGATACGTTTTGATGGCTGCTGATTCTGTGAGTTTCTGTGGCGATTTGGTTCGAAAAATTTTTGAAAAAGAGATTGATAACCATCATGAAGAAAAGCTTTTGATATGTCAAATCTGCTGCTTCCATTTGGAAAAGATAGTGCTAGTTCAGAGATCAGAACCCATTGATAAATTATTGCAGAGTTGGATGCTTCGATACTTGAAGCAGCTGATATGGATTGCAGATAGCTTTCTTGTGGCTGAGGGAGACAAGGATTGGATTGGAGGCATTGGAAATCACAAGGATGCTTTTATGCCTCTTTATGCTCTTCTTCTTGTCCTTTATGTTCTCTCTAAATCAATTGAAGGCTTCAGAAATACTGATGAACTGTATATATCAACGTTTTTTGAATTTAAGAAGATTATGAGGCCCTTTCTCCAAAATCCTCTAATATCAAATCTGTATTCTATGTTAATTGGATTACATGAAAGGTTGGAGCTAGAAGAATGCCACTCCACTTGGGGAGATTTTAATCCTTATTTTCTTCTGAGGTGAAGGCCTTTGCTATTTTTCCATTGCCATTGTTTCCATTTGTTTGGAATTTTTTGTATTATGTAAAAATGTGTTATATTCATTTACTGAGGTGGTGCATTGTCTGCAGTTTTATTTATTCGTTCAGTAAATGTTCTAAAATATTCAGTCCATCTGAATTCAAAATAATTTGGTTGATACATATAATTATGATTTAATCTTAC

Network for GWHGAAEX002675

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF10350.8	DUF2428	989	1313	3.60E-83

Protein Sequence

>GWHPAAEX002675
MSAKWRAMQHKHRYTYNSVVFPKAYIETLSLISPETFSFFDFFSKLRDFISLNSTYSQISAVKDLSSSFAQLLNSLSLQESLTLTAIRFYVEILFLENSLPLHRTLISPLTKNKKFLSVICSCFVALCKEHTGLGNSVAKRFLVPRAVLSLLGYPKLGFLNEAVEKCSVLVVSDIVSGFSSVIFDVNLGFRPSPLATEQCQDALSCLYYLLQRFPQSISALENGFCAPEEIIGVILRVLKSSAFSRDCLVAAGVSFCAAIQARIRAQDVSQFLSKAVFDLSCGDGDILEIAGNLCLEIRDLSILSRLCLLRGILTAVSRSTLNFFFKSANGGIRTLLYNAILPELCKYCEKPIDSHFNFHALTVLQICLQQMKTSIMVGLTDISGDYDPLPEEMTGCLLRIIWNNLEDPLSQTVKQVHLIFDLLLDVKSSLPSKDANENNRTFLCNIALDLLRLGARCKGKYAPLASIGKRLGSNSLLKLNPNLLSETIYGYIDDDVCCAITLFLKFFFECLRDECWGLEGIEGGYKTFRKICLHPIMQGLVSGNSKLRSNLNTYALPVLLEVDSDSIFPMLSFISVGPYLEDGKLSVDLKVDSCVAALVSLLKVSRTLALIEGDIDVDSDSSSEPCNSRGVAIVCYKGTNVRIPVDWLMLALTHVDESLRIDAAESLFLNPKTASLPSSLELKLMREAIPLNMRCSSTAFQMKWTSLFRKFFSRVRTALERQVKHGRWKPTTCIGGSHDSTSDLFGISVIHRAEDLLKFMKWFSSFLFYSCYPSAPYERKTMAMELILVMIDVWPPRLLEDNYNLYPYSKGFTSENSTLLLVGSIIDSWDKLRENSFRILLCFPTPLTGISSYDTLNKAVLWAKRLVCSPRVRESDAGALTLRLIFKKYVMDLKWGIECFLKSTQIYSQSELMNNDSSMVMRESPLVAYITALIDWLRILVENGEKNLSEACHNNFVHGVLLTLRYTFEELDWSAEEVMSSSKEIRCLLQNLLELIMRVTSLALWVVSSDAWYMPYDMDDVIDEASFVPDSSVGMESAESSLGQVNIIEKANDKNGPADHTVMVGCWLAMKEASLLLGTIIRKVPLPSCSLSESSKHDYLVKNGEETVALVTEEGLLNSQQLESIGSHFLQVLLKMKHNGAIDKTRAGFIALCNRLLCSNNPRLCKMTETWMEQLMERTTAKEQTVDDLLRRSAGIPAAFIAFFLSEPEETPKLLLPKALSWLISVAKRSLCNDSKAYNQNNEVLRSSFVKYQDEANGCASKIRDEGVIPTVHAFNVLRASFNDTNLAADTSGFCAEALIVTIRSFSSPHWEVRNSSCLAFTALVRRMIGYLNVHKRKSSRRALTGLEFFHRYPALHPFFCSELEIATKPHSDEYATDADLNIAKAVHPSLCPILVLLSMLKPSLISSGADDLLDPFMLIPFIRSCGTQSNFRVRVLAAKALIGLVSNEKLQAVINETAHSLPCERQPRMRTSFSFNLIHGILLQLSSLLDNNCKNLTDAEKKEGILSEVFHALVQCSWIGSIRSCPCAMLNSLYLLVLEQMNGISLSFSSRHTASIQTLLLKLAVESLNEKNISSPPLYDPTMVDLRKQAATSYFNCLFSTDKEAPDKCSELSNTSAFNLSKTPSNVDDITISELQERIVSCISDSMYEVRIIALKKLLQITKCISFNGRRNDNRSDIFIWVKTDLQAVLMQFLSMEENPKCIYYILKLIFSCSVLQPNEFADWNAAFCFWDTLAYLKDTVRRIKTLEILLCCMAICTKAFAKMLRRLLVDDQPQHLQEETTRAFKYINSFIILIKQQSAPSQPVSTRKAAAEAVAASGLLEEAIFMASHVSNNCILFESESLIEEEIQVYMPEFVNLYATRILDVWFTCIQLLEDEDAALRHILAKNVQKYIDLNSFGVARQVDQVIELSLGFLSKIFINWYGFVQYLLRYVLMAADSVSFCGDLVRKIFEKEIDNHHEEKLLICQICCFHLEKIVLVQRSEPIDKLLQSWMLRYLKQLIWIADSFLVAEGDKDWIGGIGNHKDAFMPLYALLLVLYVLSKSIEGFRNTDELYISTFFEFKKIMRPFLQNPLISNLYSMLIGLHERLELEECHSTWGDFNPYFLLR

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	16.630
SRP064423	SRR2545915	Juvenile tuber	12.020
SRP108465	SRR5643513	five period of Gastrodia elata	5.530
	SRR5643514	five period of Gastrodia elata	6.650
	SRR5643515	five period of Gastrodia elata	6.590
	SRR5643524	five period of Gastrodia elata	6.280
	SRR5643525	five period of Gastrodia elata	6.250
	SRR5643528	five period of Gastrodia elata	5.740
	SRR5643658	five period of Gastrodia elata	6.290
	SRR5643659	five period of Gastrodia elata	8.920
	SRR5643660	five period of Gastrodia elata	8.500
	SRR5643661	five period of Gastrodia elata	7.180
	SRR5643662	five period of Gastrodia elata	6.700
	SRR5643663	five period of Gastrodia elata	7.270
	SRR5643664	five period of Gastrodia elata	6.310
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	7.430
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	6.800
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	9.550
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	7.480
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	7.690
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	8.260
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	8.380
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	9.460
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	9.580
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	9.840
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	8.710
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	8.710
SRP279888	Gastro	Gastrodia elata tuber	7.34
	Juven	Juvenile tuber	5.04
	Mother_Gastro	Mother tuber of Gastrodia elata	5.52
	Mother_Juven	Mother tuber of Juvenile	5.90