Detail information of GWHGAAEX002708/evm.TU.scaffold_123.12


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|194335955|ref|YP_002017749.1|2.00E-55NAD-dependent epimerase/dehydratase [Pelodictyon phaeoclathratiforme BU-1]
KOGKOG15021.00E-157Flavonol reductase/cinnamoyl-CoA reductase
nrgi|703083360|ref|XP_010092193.1|1.20E-176Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase [Morus notabilis]
Swissprottr|Q9S9N9|CCR1_ARATH4.00E-158Cinnamoyl-CoA reductase 1
trEMBLtr|W9R0J3|W9R0J3_9ROSA4.00E-177Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase {ECO:0000313|EMBL:EXB50419.1}
TAIRAT1G159501.00E-157cinnamoyl coa reductase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000121528782530758+
Transcript Sequence

Network for GWHGAAEX002708

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01370.20Epimerase162462.90E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09753CCR Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Phenylpropanoid biosynthesismap00940

Gene Ontology

GO term OntologyName
GO:0050662Molecular Functioncoenzyme binding
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.040
SRR2545915Juvenile tuber23.300
SRP108465SRR5643513five period of Gastrodia elata4.330
SRR5643514five period of Gastrodia elata4.890
SRR5643515five period of Gastrodia elata2.050
SRR5643524five period of Gastrodia elata1.700
SRR5643525five period of Gastrodia elata1.460
SRR5643528five period of Gastrodia elata1.580
SRR5643658five period of Gastrodia elata1.950
SRR5643659five period of Gastrodia elata2.150
SRR5643660five period of Gastrodia elata0.890
SRR5643661five period of Gastrodia elata1.160
SRR5643662five period of Gastrodia elata1.200
SRR5643663five period of Gastrodia elata0.920
SRR5643664five period of Gastrodia elata2.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.640
SRR6049655Rhizomagastrodiae_C368-T10_good_19.790
SRR6049656Rhizomagastrodiae_C368-T07_good_115.180
SRR6049657Rhizomagastrodiae_C368-T07_good_17.240
SRR6049658Rhizomagastrodiae_C368-T04_good_18.320
SRR6049659Rhizomagastrodiae_C368-T04_good_14.840
SRR6049660Rhizomagastrodiae_C368-T01_good_17.520
SRR6049661Rhizomagastrodiae_C368-T04_good_110.150
SRR6049662Rhizomagastrodiae_C368-T01_good_17.220
SRR6049663Rhizomagastrodiae_C368-T01_good_12.580
SRR6049664Rhizomagastrodiae_C368-T10_good_19.670
SRR6049665Rhizomagastrodiae_C368-T10_good_19.670
SRP279888GastroGastrodia elata tuber 1.58
JuvenJuvenile tuber0.13
Mother_GastroMother tuber of Gastrodia elata 3.70
Mother_JuvenMother tuber of Juvenile 6.05