Gene detail

Detail information of GWHGAAEX002714/evm.TU.scaffold_123.21

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|379735049\|ref\|YP_005328555.1\|	1.00E-12	chaperone Hsp40, co-chaperone with DnaK [Blastococcus saxobsidens DD2]
KOG	KOG0951	0	RNA helicase BRR2, DEAD-box superfamily
nr	gi\|743799490\|ref\|XP_010925491.1\|	0	PREDICTED: dnaJ protein ERDJ2A-like [Elaeis guineensis]
Swissprot	tr\|Q0WT48\|DNJ21_ARATH	0	DnaJ protein ERDJ2A
trEMBL	tr\|M0S2W7\|M0S2W7_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr1P25100_001}
TAIR	AT1G79940_2	0	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000121	817752	883328	+

Transcript Sequence
>GWHTAAEX002714 AACCAAATATTAATCCCTAAAGCTTTCACTGTTCGCCCCCCTCTTCTTATCGCATGTGAACGTACTCTGCTGAGGGAGTGGGCATACGTCGCTCCAGTCCTCCAGCTGGCTTCCCTAATCCACCTTAACCTCTCTATACGCTTCATTCTTTTTTTTCATTTGGCAACTACCTAAAGCTGATGGAGAGAGCTGGATGTTGCAGAAAACTACGCACTGGAGGAGACCCTTAGCCGTTTGACTACTCTCTGATTTGAATCCTAACCCTAGACTACACCATCGATGGAAAAGAACATTTCTTATTATTTACATCACATAAACAGAACACGGAATGGCTGAAAGAGAAGAGAACAGCTCTTTGTTTGCAATCTTCATTTTAACTATAATGGCACTGTTTATAGTGCCTTGTACAATTTTAAGTTTGTGTCGGGTATTTACAAAAATGAAAAAGGACATCCATTGCCAATGCTCCCAATGCTTACATTGTGGAAAGTTTCACAAATCCTTTTTAAAACAGTTATCTACCTTTTTGACTTTGGGCAATATTACGCTTATGCTGCTTTGGGTTATAATGGCAGTTTTGGTTTATTACATTAAACATATAAGCGAAGAGATTCAATCATTCGAACCATTCAGCATTCTTGGGCTTGAACCTGGTTCTACAGACTCGGCAATTAAAAAAGCTTATAGAAGACTCTCAATACAATATCACCCTGATAAAAATCCTGATCCAGCTGCACATAAATATTTTGTAGAATTTATTTCCAAAGCTTATCAAGCCTTGACTGACCCTATTTCTCGTGAAAACTATGAAAAATATGGTCATCCAGATGGCCGCCAGGGGTTCCAAATTGGGATTGCTATACCTGCATTCTTATTTAGTTTTAATGGAGGTTCTGGTGGAGTTCTCTTACTTAGTATTGTGGGGATTTGCATTTTGCTGCCTTTAATTGCAGCGGTCATATATCTAGCAAGGTCATCAAAATATACTGGAAATAATGTCATGCATGAAACTTTGTCAGCGTACTACCATTTTATGAAACCTTCTTTGGCTCCTAGCAAAATAATAGATGTCTTTATCAAGGCTGCAGAGTTCATGGAAATACCAGTTCGCATAAGTGATGATGAACCTCTACATAAACTATTTACTGCAGTTAGAAGTGAGTTAAATATGGACCTTAAAAACGTAAAATCAGGACAGGCAAAATTTTGGAAGCAGCATCCATCCTTAGTTAAGTTGGAATTGCTATTCCAAGCTTATTTAACCAGGGAATCAGCTACATTATATCCTGCTCTACAGAATGATTTGAAACTTCTGTTAGAACGTGCTCCTCGTCTTCTTGAAGAACTAGCTAAGATAGCAGTAATGCCTCGTAGTCCTCATGGATATGGCTGGTTGAGGCCCACAGTTGGAGTTCTTGAACTCTCACAGTGTATTATTCAGGCCGTGCCTCTGAGTGCAAGGAAGCCAATTGCAGGTAGCTCAGAAGGCATTGCACCATTCTTGCAGCTCCCACACTTCACTGAGACAACCGCCAAGCAGATAACCCGAAAGAAAATACGATCATTTCAAGAGCTGCGAGATCTCAACGCGGAGGAGCGGAAGGAGATGCTGGCCGAAATCGCAGGGCTTTCTGCGGCGGAGTTGCAGGACGTGGAGCTTGCGCTTGCGATGCTTCCTTCCGTCTCAGTCGACGTGACATGCGAGACGGACGGCGAAGAGGGTATTCAGGAGGGAGACATCGTCACAGCATACGTTTGGATTACCCTCCGGCGCGGCAACGGCCTCATAGCCGGACTTCCTCACTGCCCCCGCTTCCCGTTCCGCAAAGAGGAAAGCTTCTGGGTGCTTCTGGCCGACGAGGAGGCGAACGAGGTGTGGACGTCTCAGAAGATCTCTTTCATGGACGAGGCGGCCGCCCTCGCTGCGGCATCCAGCGAGATCCAAGAAAGGAAGGAGAGCCTGGGCGCCAGCGCCGGCGAAATAAGTGCGGCTGTGAGAGACGCCGCGGAGAAGGTGAAGCGCGGGTCGAGGCTCGCATTCAGCAAGTTTCGCGCGCCCGGGAAGGGAAGCTACAGCCTCAGCGCATATTGCTTGTGCGATTCGTGGATAGGCTGCGACATTAAGGGCTCCGTCAAGCTGAGAGTCCTGAAACGAAGCCGGGCTGCCGACGAGGGTATCCAGCAACGGGAAGAGGAAGATGAAGAGGACGAAGAAGATGAGCAGGAAGATCATGATGAGAGCGAGTACAGTAGCGAGCAAGATGTAGGGGGAGATGAGAGCGATGAATTGAAGCCGAGCAAGGGTTAGGGTTCTGATCTGAAGTAGTAGATATGGGTTTTTCTAAAACATTTTTTTATCATTTTTTTAATTCATAATGCACAAGAGAATAATAAAGGTAGATTTTAAAATTGTTGTAATGCCACAATAAGAGCCTGATGTGTGGGAGAGATTGAGAAAAAGATATTCTTTTGATGCCAAATTAGGGCACAAATGGGATCTTACCAAGCATAAAGAGCATTGTGATTGGATTCATTGAATTGTTGGCTCATATTATTTTATATTTAAAAGACTAGCCAGTTCTGAATTTTCTATATGGGCATGAT

Network for GWHGAAEX002714

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00226.30	DnaJ	100	161	1.30E-18
PF02889.15	Sec63	223	599	1.40E-25

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K09540	SEC63, DNAJC23	Protein export	map03060
K09540	SEC63, DNAJC23	Protein processing in endoplasmic reticulum	map04141

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	114.310
SRP064423	SRR2545915	Juvenile tuber	102.510
SRP108465	SRR5643513	five period of Gastrodia elata	46.650
	SRR5643514	five period of Gastrodia elata	34.190
	SRR5643515	five period of Gastrodia elata	36.190
	SRR5643524	five period of Gastrodia elata	37.010
	SRR5643525	five period of Gastrodia elata	62.450
	SRR5643528	five period of Gastrodia elata	44.390
	SRR5643658	five period of Gastrodia elata	50.940
	SRR5643659	five period of Gastrodia elata	43.920
	SRR5643660	five period of Gastrodia elata	43.100
	SRR5643661	five period of Gastrodia elata	42.470
	SRR5643662	five period of Gastrodia elata	36.360
	SRR5643663	five period of Gastrodia elata	47.600
	SRR5643664	five period of Gastrodia elata	44.090
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	31.130
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	37.830
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	47.140
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	41.610
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	32.930
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	32.210
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	35.560
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	30.160
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	30.070
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	29.480
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	34.300
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	34.300
SRP279888	Gastro	Gastrodia elata tuber	27.42
	Juven	Juvenile tuber	22.49
	Mother_Gastro	Mother tuber of Gastrodia elata	40.92
	Mother_Juven	Mother tuber of Juvenile	20.70