Detail information of GWHGAAEX002726/evm.TU.scaffold_123.47


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG30611.00E-47Proteasome maturation factor
nrgi|743806815|ref|XP_010927826.1|4.60E-65PREDICTED: cyclin-B1-2-like [Elaeis guineensis]
Swissprottr|Q0DWQ7|CCB12_ORYSJ5.00E-29Cyclin-B1-2
trEMBLtr|A0A0A0KUK6|A0A0A0KUK6_CUCSA1.00E-50Uncharacterized protein {ECO:0000313|EMBL:KGN52569.1}
TAIRAT1G672501.00E-47Proteasome maturation factor UMP1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012117850641810102-
Transcript Sequence

Network for GWHGAAEX002726

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05348.10UMP1101271.50E-27
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K11599POMP, UMP1 Proteasome map03050

Gene Ontology

GO term OntologyName
GO:0043248Biological Processproteasome assembly

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms25.170
SRR2545915Juvenile tuber31.450
SRP108465SRR5643513five period of Gastrodia elata39.930
SRR5643514five period of Gastrodia elata56.000
SRR5643515five period of Gastrodia elata38.440
SRR5643524five period of Gastrodia elata43.710
SRR5643525five period of Gastrodia elata77.190
SRR5643528five period of Gastrodia elata66.640
SRR5643658five period of Gastrodia elata94.240
SRR5643659five period of Gastrodia elata36.740
SRR5643660five period of Gastrodia elata35.790
SRR5643661five period of Gastrodia elata40.590
SRR5643662five period of Gastrodia elata56.520
SRR5643663five period of Gastrodia elata61.370
SRR5643664five period of Gastrodia elata60.410
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_132.020
SRR6049655Rhizomagastrodiae_C368-T10_good_149.350
SRR6049656Rhizomagastrodiae_C368-T07_good_140.970
SRR6049657Rhizomagastrodiae_C368-T07_good_127.830
SRR6049658Rhizomagastrodiae_C368-T04_good_134.990
SRR6049659Rhizomagastrodiae_C368-T04_good_127.800
SRR6049660Rhizomagastrodiae_C368-T01_good_130.530
SRR6049661Rhizomagastrodiae_C368-T04_good_137.630
SRR6049662Rhizomagastrodiae_C368-T01_good_147.730
SRR6049663Rhizomagastrodiae_C368-T01_good_140.820
SRR6049664Rhizomagastrodiae_C368-T10_good_145.100
SRR6049665Rhizomagastrodiae_C368-T10_good_145.100
SRP279888GastroGastrodia elata tuber 58.58
JuvenJuvenile tuber30.11
Mother_GastroMother tuber of Gastrodia elata 33.37
Mother_JuvenMother tuber of Juvenile 19.30