Detail information of GWHGAAEX002752/evm.TU.scaffold_124.16
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|434389466|ref|YP_007100077.1| | 2.00E-87 | protease II [Chamaesiphon minutus PCC 6605] |
| KOG | KOG2237 | 0 | Predicted serine protease |
| nr | gi|672130752|ref|XP_008788917.1| | 0 | PREDICTED: prolyl endopeptidase-like [Phoenix dactylifera] |
| trEMBL | tr|M0TTN5|M0TTN5_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P25820_001} |
| TAIR | AT1G69020 | 0 | Prolyl oligopeptidase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000131 | 372548 | 414658 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX002752
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF02897.14 | Peptidase_S9_N | 163 | 566 | 1.40E-48 |
| PF00326.20 | Peptidase_S9 | 667 | 759 | 1.10E-23 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006508 | Biological Process | proteolysis |
| GO:0004252 | Molecular Function | serine-type endopeptidase activity |
| GO:0008236 | Molecular Function | serine-type peptidase activity |
| GO:0070008 | Molecular Function | serine-type exopeptidase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 3.020 |
| SRR2545915 | Juvenile tuber | 3.360 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 2.850 |
| SRR5643514 | five period of Gastrodia elata | 3.480 | |
| SRR5643515 | five period of Gastrodia elata | 2.070 | |
| SRR5643524 | five period of Gastrodia elata | 3.460 | |
| SRR5643525 | five period of Gastrodia elata | 1.350 | |
| SRR5643528 | five period of Gastrodia elata | 1.460 | |
| SRR5643658 | five period of Gastrodia elata | 1.450 | |
| SRR5643659 | five period of Gastrodia elata | 1.730 | |
| SRR5643660 | five period of Gastrodia elata | 2.330 | |
| SRR5643661 | five period of Gastrodia elata | 1.710 | |
| SRR5643662 | five period of Gastrodia elata | 1.430 | |
| SRR5643663 | five period of Gastrodia elata | 1.240 | |
| SRR5643664 | five period of Gastrodia elata | 1.530 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 3.120 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 4.670 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 2.810 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 3.430 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 2.910 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 2.520 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 4.490 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 2.790 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 3.290 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 2.960 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 3.170 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 3.170 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 2.25 |
| Juven | Juvenile tuber | 4.61 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 2.47 | |
| Mother_Juven | Mother tuber of Juvenile | 3.51 |