Detail information of GWHGAAEX002753/evm.TU.scaffold_124.21


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743861567|ref|XP_010943317.1|3.34E-146PREDICTED: transcription factor BIM2 isoform X2 [Elaeis guineensis]
Swissprottr|Q9LEZ3|BIM1_ARATH3.00E-60Transcription factor BIM1
trEMBLtr|D7SIP8|D7SIP8_VITVI8.00E-96Putative uncharacterized protein {ECO:0000313|EMBL:CBI15359.3}
TAIRAT1G690102.00E-58BES1-interacting Myc-like protein 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000131593706611938+
Transcript Sequence

Network for GWHGAAEX002753

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00010.25HLH1932421.10E-14
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybHLH

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046983Molecular Functionprotein dimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms24.440
SRR2545915Juvenile tuber22.890
SRP108465SRR5643513five period of Gastrodia elata17.570
SRR5643514five period of Gastrodia elata15.750
SRR5643515five period of Gastrodia elata18.240
SRR5643524five period of Gastrodia elata14.570
SRR5643525five period of Gastrodia elata19.710
SRR5643528five period of Gastrodia elata26.710
SRR5643658five period of Gastrodia elata20.050
SRR5643659five period of Gastrodia elata19.280
SRR5643660five period of Gastrodia elata20.340
SRR5643661five period of Gastrodia elata18.660
SRR5643662five period of Gastrodia elata24.550
SRR5643663five period of Gastrodia elata20.520
SRR5643664five period of Gastrodia elata24.670
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.670
SRR6049655Rhizomagastrodiae_C368-T10_good_121.820
SRR6049656Rhizomagastrodiae_C368-T07_good_116.690
SRR6049657Rhizomagastrodiae_C368-T07_good_118.680
SRR6049658Rhizomagastrodiae_C368-T04_good_123.340
SRR6049659Rhizomagastrodiae_C368-T04_good_124.770
SRR6049660Rhizomagastrodiae_C368-T01_good_118.900
SRR6049661Rhizomagastrodiae_C368-T04_good_121.940
SRR6049662Rhizomagastrodiae_C368-T01_good_117.390
SRR6049663Rhizomagastrodiae_C368-T01_good_117.380
SRR6049664Rhizomagastrodiae_C368-T10_good_118.540
SRR6049665Rhizomagastrodiae_C368-T10_good_118.540
SRP279888GastroGastrodia elata tuber 28.20
JuvenJuvenile tuber21.02
Mother_GastroMother tuber of Gastrodia elata 28.84
Mother_JuvenMother tuber of Juvenile 30.84