Gene detail

Detail information of GWHGAAEX002756/evm.TU.scaffold_124.26

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|383458549\|ref\|YP_005372538.1\|	1.00E-152	heat shock protein 90 [Corallococcus coralloides DSM 2259]
KOG	KOG0019	0	Molecular chaperone (HSP90 family)
nr	gi\|743861671\|ref\|XP_010943343.1\|	0	PREDICTED: heat shock protein 83-like [Elaeis guineensis]
Swissprot	tr\|P36183\|ENPL_HORVU	0	Endoplasmin homolog (Precursor)
trEMBL	tr\|M0SIH6\|M0SIH6_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P28100_001}
TAIR	AT2G04030	0	Chaperone protein htpG family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000131	877181	892190	-

Transcript Sequence
>GWHTAAEX002756 GGGGTTTTAAGTAAAAGTTAAGGCATCGGAATCTTCACATTCTCCATTTCCTCCATAAACCCTTCGTTCCTCGCTTAGGGTTTACTCCCCAAACTCTTATCCAAGATCGCGCAGTACACAAACTAGGAAGCTCTTGATTTTTTCATGGCGCAGGCTGCGAGCAAAACTTTTAGCGCCGCCGCCTCCCTAGAAAAGTCACCATTCTCAAAGTTCAATCCCCGCAGAGCAATCGGAGTCCAAAACTCTTTTTTATCACGGCCCTTTTTGAATGGGAAAGGTCTCACGGCCGCTGGATTGAGTTGGAAGCTTGGGAAGAAGAGAGATGGAAGTGTTTCTGTTCGATGCGATGTGGCGGTTGCAGAGAAGGATAAAGCCGAGGATGTTGAGGGGGAGAAATATGAATACCAGGCTGAGGTTAGCCGTTTACTAAACTTAATTGTTCATAGCTTATATAGCCATAAAGAGGTGTTTCTTCGCGAGCTAGTAAGTAATGCAAGTGATGCGTTGGACAAGTTAAGATTTTTGAGCGTAACCGATGCTTCTCTCCTTGGTGATGGTGGTGACTTGGAAATTCGAATCAAAGTTGATCCAGATGATGGGACTATTATCATTAAAGATACGGGCATTGGAATGACCAAGGAAGAACTGATTGACTGCCTTGGAACTATTGCTCAAAGTGGAACATCTAAATTCTTGAAAGCATTGAAGGAGAATAAAGATATTGGTGCAGATAATGGTTTGATTGGCCAATTTGGTGTTGGTTTCTATTCTGCATTTCTTGTTGCAGAGAAGGTTGCAGTGTCAACTAAAAGTCCGAAATCTGACAAGCAATATGTGTGGGAAGCAGTTGCTGACCATAGTTCTTATGTGATCAAGGAAGAGACTGATCCTGAGAATTTACTGCGCCGTGGAACCCAAATCACACTTTATTTAAGGGCAGATGACAAGGCTGAATTTGTTAATCCCTCAAGGATCCAGGGCTTGGTTAAGAACTATTCTCAGTTTGTAGCCTTTCCTATTTACACCTGGCAAGAAAAATCGAGGACTGTAGAAGTTGAAGAAGATGAAGAAGTAAAGGAGGGTGAGGATGCTAAACCTGAGGCTGAAAAGAAGAAGAAGAAAAAGTCTGTCATTGAAAAATACTGGGATTGGGAATTGGCAAATGAAACTAAACCAATTTGGATGCGAAATCCAAAGGAAGTCGAGAAAAAAGAGTATAATGAGTTCTATTCGAAGACATTTAACGAGTACTTGGATCCACTAGTCTATACTCATTTCACAACAGAGGGAGAGGTGGAATTTAAAAGCATTCTTTTTATTCCTGGATTTGCTCCTCTTAATAGTGAGGATATAGTGAATCCTAAGACAAAAAATATCCGCTTGTATGTGAAACGGGTGTTTATCTCTGATGATTTTGATGGTGAATTGTTTCCACGATATCTAAGCTTTGTAAAGGGTGTTGTTGATTCCAATGATCTTTCTCTCAATGTTTCTCGCGAAATCCTTCAAGAAAGTAGAATTGTAAGAATCATGCGGAAGAGGCTCGTGCGAAAAACATTTGATATGATTCAGGGGCTAGCTGAAAGTGAAAACAAGGAGGATTATAAAAAGTTCTGGGATAATTTTGGCAAACTTCTCAAGTTAGGCTGCATAGAAGACTCTGGAAACCACAGTAGATTATGTCCTCTTCTGCGCTATTACTCTTCCAAAAGTGAGGAGGCGTTGATAAGCTTAGATCAATATGTTGAAAGGATGACTGAGAATCAGAATGCTATATATTACCTTGCATCAGATAGCCTTAAAAGTGCTAAAAGTGCCCCATTTTTGGAGAAATTGGTTCAAAAGGATATAGAGGTATTATATCTTGTGGAACCAATTGATGAGGTTGCTATACAGAATCTACAGACATACAAAGAAAAGAAGTTTGTGGATATTAGCAAGGAAGATCTTGAATTGGGAGATGAAGATGAAGTAAAAGAAAGAGAGGCCATGCAGGAGCACAATCTTCTTTGTGATTGGATAAAGAAACAGCTTGGCGACAAGGTTGCCAAGGTTCAAGTTTCAAAGAGGCTTAGCTCTTCTCCTTGTGTGCTGGTTTCTGGCAAGTTTGGGTGGTCTGCCAACATGGAAAGGCTCATGAAAGCACAGACTCTTGGCGACACATCAAGCTTGGAATTTATGAGGGGAAGGAGAATATTAGAGATTAATCCGGATCATCCTATAATTAAGGACTTGGGTGCTGCTTGTAAGAATGATCCTGACAGCTCGGAAGCTGAGAGAGCTGTTGATCTTTTATATGATACAGCTTTGATCTCTAGTGGATTCACCCCTGACAGCCCCTCGGAACTGGGAAACAAAATTTATGAGATGATGGCTATTGCTCTTGGAGGCCGGTGGGGCCGGTCGGATTCCCAATCAGTCACTTACGATGAGTCCGAGGATACTTCCGGTGAAAGCGCATACGAAGCAGAGTCTGGTGATATTGAAGAAGCCGAGATCTTGGAGCCCTCTGAGGTCAGGGATGAAAGCAGTGATCCATGGAGGGACTGAACATGAGAAAAATTTATGATCCTTCCATATATATATATATATATATATGCTAAGAGGGAAAAGAGTGCTAGTAGTAGGCATTGAGGAAGAAGTAATGATAGAAAAAAATGGAGGCCAATAAACAATGGAACCATTTCCTTTTTTTGAGCTTATATGATAATTATTGAATTCATATTTGGCATATGGAATTTTATGCGGCTTGTTGATTTGAAAACAGACTGTCTTGTGCTGGTTCTGAGTTTTGGCTTTAAGGTTTCCTTGCATTGATGAAGATAATGCCTAAATAAAATGAGTTTTATATGTACAATGAAAGTTCAGGTGCTAGAAAATGTATTGCTTAAAAATGAGATGCTAGATGTCTCTTTTTCAAAAGTTTATGGACATGCCGAAACATGATGAAGAGTTGTTTATCGTTCTTCCAATCCTGTTTTACCAGTCTTAAAATGAATATTGTATTTTTGAATAATCTCAAGA

Network for GWHGAAEX002756

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02518.25	HATPase_c	106	265	4.20E-12
PF00183.17	HSP90	270	770	1.90E-191

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K09487	HSP90B, TRA1	Protein processing in endoplasmic reticulum	map04141
		PI3K-Akt signaling pathway	map04151
		IL-17 signaling pathway	map04657
		Estrogen signaling pathway	map04915
		Thyroid hormone synthesis	map04918
		Plant-pathogen interaction	map04626

Gene Ontology

GO term	Ontology	Name
GO:0006457	Biological Process	protein folding
GO:0051082	Molecular Function	unfolded protein binding
GO:0005524	Molecular Function	ATP binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	129.390
SRP064423	SRR2545915	Juvenile tuber	168.290
SRP108465	SRR5643513	five period of Gastrodia elata	71.770
	SRR5643514	five period of Gastrodia elata	69.350
	SRR5643515	five period of Gastrodia elata	61.950
	SRR5643524	five period of Gastrodia elata	63.110
	SRR5643525	five period of Gastrodia elata	28.720
	SRR5643528	five period of Gastrodia elata	27.270
	SRR5643658	five period of Gastrodia elata	14.950
	SRR5643659	five period of Gastrodia elata	157.150
	SRR5643660	five period of Gastrodia elata	157.690
	SRR5643661	five period of Gastrodia elata	155.990
	SRR5643662	five period of Gastrodia elata	183.150
	SRR5643663	five period of Gastrodia elata	183.060
	SRR5643664	five period of Gastrodia elata	193.020
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	90.500
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	68.700
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	84.500
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	93.650
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	54.710
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	49.700
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	74.780
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	60.180
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	97.970
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	75.460
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	83.190
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	83.190
SRP279888	Gastro	Gastrodia elata tuber	121.58
	Juven	Juvenile tuber	166.42
	Mother_Gastro	Mother tuber of Gastrodia elata	25.52
	Mother_Juven	Mother tuber of Juvenile	64.83