Detail information of GWHGAAEX002760/evm.TU.scaffold_124.30


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG44551.00E-33Uncharacterized conserved protein
nrgi|743889962|ref|XP_010910965.1|2.67E-55PREDICTED: ER membrane protein complex subunit 6-like [Elaeis guineensis]
trEMBLtr|C6SYQ2|C6SYQ2_SOYBN3.00E-55Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G03832.1}
TAIRAT5G495401.00E-33Rab5-interacting family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000131954731982395-
Transcript Sequence

Network for GWHGAAEX002760

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07019.11Rab5ip371151.10E-18
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms47.810
SRR2545915Juvenile tuber65.070
SRP108465SRR5643513five period of Gastrodia elata48.740
SRR5643514five period of Gastrodia elata61.320
SRR5643515five period of Gastrodia elata55.010
SRR5643524five period of Gastrodia elata59.160
SRR5643525five period of Gastrodia elata55.790
SRR5643528five period of Gastrodia elata69.490
SRR5643658five period of Gastrodia elata59.920
SRR5643659five period of Gastrodia elata54.530
SRR5643660five period of Gastrodia elata49.960
SRR5643661five period of Gastrodia elata53.700
SRR5643662five period of Gastrodia elata49.350
SRR5643663five period of Gastrodia elata48.850
SRR5643664five period of Gastrodia elata45.580
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_135.910
SRR6049655Rhizomagastrodiae_C368-T10_good_163.050
SRR6049656Rhizomagastrodiae_C368-T07_good_142.460
SRR6049657Rhizomagastrodiae_C368-T07_good_132.280
SRR6049658Rhizomagastrodiae_C368-T04_good_138.990
SRR6049659Rhizomagastrodiae_C368-T04_good_130.400
SRR6049660Rhizomagastrodiae_C368-T01_good_130.780
SRR6049661Rhizomagastrodiae_C368-T04_good_132.900
SRR6049662Rhizomagastrodiae_C368-T01_good_142.100
SRR6049663Rhizomagastrodiae_C368-T01_good_138.420
SRR6049664Rhizomagastrodiae_C368-T10_good_152.020
SRR6049665Rhizomagastrodiae_C368-T10_good_152.020
SRP279888GastroGastrodia elata tuber 49.57
JuvenJuvenile tuber48.62
Mother_GastroMother tuber of Gastrodia elata 57.38
Mother_JuvenMother tuber of Juvenile 67.01