Detail information of GWHGAAEX002762/evm.TU.scaffold_124.32


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG13050Amino acid transporter protein
nrgi|743807125|ref|XP_010927988.1|0PREDICTED: sodium-coupled neutral amino acid transporter 2-like [Elaeis guineensis]
trEMBLtr|M0TTA1|M0TTA1_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P24480_001}
TAIRAT3G303900Transmembrane amino acid transporter family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013111191081128192+
Transcript Sequence

Network for GWHGAAEX002762

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01490.17Aa_trans434167.20E-57
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14207SLC38A2, SNAT2 Protein digestion and absorption map04974
Glutamatergic synapsemap04724
GABAergic synapsemap04727

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms44.690
SRR2545915Juvenile tuber28.570
SRP108465SRR5643513five period of Gastrodia elata23.380
SRR5643514five period of Gastrodia elata20.690
SRR5643515five period of Gastrodia elata21.290
SRR5643524five period of Gastrodia elata21.710
SRR5643525five period of Gastrodia elata36.960
SRR5643528five period of Gastrodia elata49.890
SRR5643658five period of Gastrodia elata41.530
SRR5643659five period of Gastrodia elata17.740
SRR5643660five period of Gastrodia elata17.100
SRR5643661five period of Gastrodia elata18.180
SRR5643662five period of Gastrodia elata18.810
SRR5643663five period of Gastrodia elata18.550
SRR5643664five period of Gastrodia elata18.260
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.840
SRR6049655Rhizomagastrodiae_C368-T10_good_115.070
SRR6049656Rhizomagastrodiae_C368-T07_good_115.380
SRR6049657Rhizomagastrodiae_C368-T07_good_125.840
SRR6049658Rhizomagastrodiae_C368-T04_good_127.070
SRR6049659Rhizomagastrodiae_C368-T04_good_137.130
SRR6049660Rhizomagastrodiae_C368-T01_good_119.260
SRR6049661Rhizomagastrodiae_C368-T04_good_124.980
SRR6049662Rhizomagastrodiae_C368-T01_good_113.580
SRR6049663Rhizomagastrodiae_C368-T01_good_118.680
SRR6049664Rhizomagastrodiae_C368-T10_good_117.110
SRR6049665Rhizomagastrodiae_C368-T10_good_117.110
SRP279888GastroGastrodia elata tuber 20.64
JuvenJuvenile tuber16.43
Mother_GastroMother tuber of Gastrodia elata 35.75
Mother_JuvenMother tuber of Juvenile 36.76