Detail information of GWHGAAEX002767/evm.TU.scaffold_124.38


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|427702748|ref|YP_007045970.1|4.00E-135delta-aminolevulinic acid dehydratase [Cyanobium gracile PCC 6307]
KOGKOG27940Delta-aminolevulinic acid dehydratase
nrgi|544369624|gb|AGW21359.1|0delta-aminolevulinic acid dehydratase [Musa acuminata AAA Group]
Swissprottr|Q5Z8V9|HEM2_ORYSJ0Delta-aminolevulinic acid dehydratase, chloroplastic (Precursor)
trEMBLtr|A0A088FXQ7|A0A088FXQ7_MUSAC0Delta-aminolevulinic acid dehydratase {ECO:0000313|EMBL:AIM55745.1}
TAIRAT1G697400Aldolase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013113510781385582-
Transcript Sequence

Network for GWHGAAEX002767

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00490.20ALAD934101.10E-129
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01698hemB, ALAD Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Porphyrin and chlorophyll metabolismmap00860

Gene Ontology

GO term OntologyName
GO:0033014Biological Processtetrapyrrole biosynthetic process
GO:0003824Molecular Functioncatalytic activity
GO:0046872Molecular Functionmetal ion binding
GO:0004655Molecular Functionporphobilinogen synthase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms45.500
SRR2545915Juvenile tuber77.880
SRP108465SRR5643513five period of Gastrodia elata49.010
SRR5643514five period of Gastrodia elata58.020
SRR5643515five period of Gastrodia elata48.270
SRR5643524five period of Gastrodia elata56.670
SRR5643525five period of Gastrodia elata25.040
SRR5643528five period of Gastrodia elata27.290
SRR5643658five period of Gastrodia elata36.260
SRR5643659five period of Gastrodia elata42.400
SRR5643660five period of Gastrodia elata37.140
SRR5643661five period of Gastrodia elata45.530
SRR5643662five period of Gastrodia elata45.570
SRR5643663five period of Gastrodia elata48.720
SRR5643664five period of Gastrodia elata37.170
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_152.340
SRR6049655Rhizomagastrodiae_C368-T10_good_155.670
SRR6049656Rhizomagastrodiae_C368-T07_good_155.140
SRR6049657Rhizomagastrodiae_C368-T07_good_141.950
SRR6049658Rhizomagastrodiae_C368-T04_good_139.220
SRR6049659Rhizomagastrodiae_C368-T04_good_133.720
SRR6049660Rhizomagastrodiae_C368-T01_good_143.590
SRR6049661Rhizomagastrodiae_C368-T04_good_145.140
SRR6049662Rhizomagastrodiae_C368-T01_good_158.540
SRR6049663Rhizomagastrodiae_C368-T01_good_147.890
SRR6049664Rhizomagastrodiae_C368-T10_good_153.820
SRR6049665Rhizomagastrodiae_C368-T10_good_153.820
SRP279888GastroGastrodia elata tuber 39.78
JuvenJuvenile tuber25.20
Mother_GastroMother tuber of Gastrodia elata 21.31
Mother_JuvenMother tuber of Juvenile 15.47