Detail information of GWHGAAEX002770/evm.TU.scaffold_124.43
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|670412254|ref|XP_008647280.1| | 4.99E-161 | PREDICTED: uncharacterized protein LOC100191217 isoform X1 [Zea mays] |
| Swissprot | tr|Q96519|PER11_ARATH | 1.00E-139 | Peroxidase 11 (Precursor) |
| trEMBL | tr|M0SC94|M0SC94_MUSAM | 2.00E-168 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P06270_001} |
| TAIR | AT1G68850 | 4.00E-139 | Peroxidase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000131 | 1514700 | 1517307 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX002770
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00141.22 | peroxidase | 55 | 303 | 5.30E-64 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00430 | E1.11.1.7 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006979 | Biological Process | response to oxidative stress |
| GO:0042744 | Biological Process | hydrogen peroxide catabolic process |
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0004601 | Molecular Function | peroxidase activity |
| GO:0020037 | Molecular Function | heme binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 56.520 |
| SRR2545915 | Juvenile tuber | 234.920 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 47.590 |
| SRR5643514 | five period of Gastrodia elata | 32.500 | |
| SRR5643515 | five period of Gastrodia elata | 18.630 | |
| SRR5643524 | five period of Gastrodia elata | 13.410 | |
| SRR5643525 | five period of Gastrodia elata | 16.370 | |
| SRR5643528 | five period of Gastrodia elata | 33.520 | |
| SRR5643658 | five period of Gastrodia elata | 10.410 | |
| SRR5643659 | five period of Gastrodia elata | 4.680 | |
| SRR5643660 | five period of Gastrodia elata | 2.250 | |
| SRR5643661 | five period of Gastrodia elata | 1.960 | |
| SRR5643662 | five period of Gastrodia elata | 2.790 | |
| SRR5643663 | five period of Gastrodia elata | 0.810 | |
| SRR5643664 | five period of Gastrodia elata | 2.720 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 27.960 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 71.280 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 58.430 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 25.730 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 31.980 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 20.850 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 28.480 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 47.540 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 30.510 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 16.500 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 36.810 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 36.810 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 3.63 |
| Juven | Juvenile tuber | 0.87 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 49.49 | |
| Mother_Juven | Mother tuber of Juvenile | 15.31 |