Gene detail

Detail information of GWHGAAEX002772/evm.TU.scaffold_124.45

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|521467262\|ref\|YP_008154648.1\|	8.00E-106	hypothetical protein SCE1572_41440 [Sorangium cellulosum So0157-2]
KOG	KOG2254	0	Predicted endo-1,3-beta-glucanase
nr	gi\|743810700\|ref\|XP_010928964.1\|	0	PREDICTED: uncharacterized protein LOC105050579 [Elaeis guineensis]
trEMBL	tr\|K7MWG8\|K7MWG8_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA19G05550.2}
TAIR	AT5G15870	0	glycosyl hydrolase family 81 protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000131	1549859	1552018	+

Transcript Sequence
>GWHTAAEX002772 ATGTTGAAGAAGAAGAGTATTTCAAGATCTGTCACCAAAATTATAAGTAAAGCCCTCAGATTTTCCATCAAGAAGAGAAAAAGAGCGCTTCATCCGTCCCCTTCAGTTCCTCCATCTCTTCCTCCTATGATGCCGCCGTCTTCTTCTTCTTCTTCACATCACAGACCTTTCCTTTTTCCCCATACGAACTCGCCGATCCTTCCAGACCCATCCGCCTTCTTCTCCCCTGCCCTCCTCTGCTCCCCCCTTCCGACCAACTCCTTCTTCCAAAACCTGGTCCTCAAAAATGGCGACCAGCCCGAATACATCCACCCTTACCTCATCAAATCCTCCGCCTCTTCCCTCTCCATCTCTCACCCCTCCCGCTTTGCCACTGCCGCCTTCATATACCAGACCTTCGTCCCCGATCTAACAGTCTCCTCCTCCCCTTCTTCCCAATCCAAGCACTTCATCTCCTCCTTCGACGATCTCAGCGTAACCCTAGATCTTCCTCCCTCGCTCCGCTTTTTCCTAGTCCGCGGCTGCCCCTTCATCACTTTCTCAACCCTCGCCTCAGCTTCAGATCTCCTTCTTTCCTCCATTCACGCCTTCGTCTCCGTCGTCCCCAACTCCTCCTTCACTAAACACACCTTCAAGCTCAATAGCGGACAGACTTTCCTCTGTTACTCCTCGACGCCGATCAGATTCCAGCAATCCACCACTACGCAGCTCACTGCCGCCGCAGGCTTCTCCGGCACCGTACGGCTCGCCTTCCTCCCAGATCCAGCCCATGAATCCATCCTCGATCAGTACTCCTCTTGTTACCCTATCTCCGGCAGAGCTGCTTTCACAAGACCGGGCCAAGTTGAGTACAGGTGGGAGAAGAAGGGACATGGCGACCTTCTTATGCTCGCTCATCCTCTCCATCTCCGTCTTCTCGACCATGGCGGAGAGCTGATTCCAGAGCTCAAGTACAGAAGCATCGACGGCGATCTAGTCGGCGTTGCTGGCGATTCTTGGTTCTTAAAGACGGATCCTGCATCCACCGCATGGCATTCGACGAAAGGCCTCAGTGAAGACGGAGCGCAAGAAGTCGTCTCGGCTTTATCAAAGGACGCAAGCGATCTGGAGATCTCGGCCATAGAAACCACTTCGTCTTATTTCTACGGAAAGGCGATCGCGAGGGCAGCCAGATTGGGTCTCATCGCAGAAGAAGTCGGCTTCCCAGACGCGATTCCCGCGGTTGTGAGCTTCCTGAGGAGATCTATAACCCCCTGGCTGGAAGGAACCTTTCACGGAAATGGATTCCTGTACGATCCCAAATGGGGCGGGCTTGTTACGAAGCAGGGATCGATCGATTCCGGCGCGGATTTCGGCTTTGGAGTCTTCAATGATCACCATTACCACCTCGGATACTTCCTCTACGCGATTGCTGTTCTTGCTAAGTTCGATCCAATATGGGGGAGAGAGTTTAGACCGCAGGCTTACTCAATCATGGCGGATTTCATGAACCTGACGGGATCGAGGTATGCGAGATTGCGATGCTTTGATCTCTGGAAGCTGCATTCATGGGCAGGAGGATTGACGGAGTTTGCGGACGGGAGGAATCAGGAGAGCACGAGCGAGGCGGTGAGCGCTTATTATTCTGCAGCGCTGTTGGGTCTGAGCTACGGAGACTCTCATCTGGTGGCTTTGGGATCGACATTAACGGCCTTCGAGATCGCTGCTGCGGAGACGTGGTGGCATGTGAGGCAGGACGAAGGAAGAATGTATGAGGAGGATTTCAGAAGGGAGAATCGATTGGTGGGAGTGCTGTGGGCCAATAAAAGAGACAGCGGGCTCTGGTTCGCGCCTGCGGAATGGAGGGAGTGCAGATTGGGGATTCAGGTTCTGCCATTGCTGCCGGTAACCGAAGAGCTCTTTAGGGATTTAGGGTTTGTGAAGGAGTTGGTGGAGTGGGCGTTGCCGGCTCTGAGGAGGGAGGGAGTCGGCGATGGCTGGAAAGGGTTTGTGTATGCATTGGAGGGCATGTTTGATAGGAAAGATGCTTTGGTGAAGATTAAGAGCTTGGCTACGTTTGATGACGGGAATTCGCTGTCGAATCTGCTGTGGTGGATTTATAGCAGAGGGGAAGGAGGAGGAGAATTGACCGGTGCTTGGTTCGGTCATTACTGCCATTGA

Network for GWHGAAEX002772

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module13

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03639.12	Glyco_hydro_81	81	699	3.10E-168

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GH81
Carbohydrate-Active enzymes Family	GH81

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	32.120
SRP064423	SRR2545915	Juvenile tuber	38.740
SRP108465	SRR5643513	five period of Gastrodia elata	55.900
	SRR5643514	five period of Gastrodia elata	41.400
	SRR5643515	five period of Gastrodia elata	41.110
	SRR5643524	five period of Gastrodia elata	46.720
	SRR5643525	five period of Gastrodia elata	63.690
	SRR5643528	five period of Gastrodia elata	60.370
	SRR5643658	five period of Gastrodia elata	46.020
	SRR5643659	five period of Gastrodia elata	56.300
	SRR5643660	five period of Gastrodia elata	54.550
	SRR5643661	five period of Gastrodia elata	62.450
	SRR5643662	five period of Gastrodia elata	47.900
	SRR5643663	five period of Gastrodia elata	48.960
	SRR5643664	five period of Gastrodia elata	222.180
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	36.180
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	43.350
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	39.140
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	32.380
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	32.060
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	35.400
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	31.380
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	38.630
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	45.960
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	42.620
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	46.760
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	46.760
SRP279888	Gastro	Gastrodia elata tuber	32.13
	Juven	Juvenile tuber	35.76
	Mother_Gastro	Mother tuber of Gastrodia elata	53.79
	Mother_Juven	Mother tuber of Juvenile	31.12