Gene detail

Detail information of GWHGAAEX002778/evm.TU.scaffold_124.51

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1877	3.00E-155	Putative transmembrane protein cmp44E
nr	gi\|672133961\|ref\|XP_008790619.1\|	0	PREDICTED: uncharacterized protein LOC103707766 isoform X2 [Phoenix dactylifera]
trEMBL	tr\|M0SGM1\|M0SGM1_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P21550_001}
TAIR	AT2G41830	3.00E-155	Uncharacterized protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000131	1843262	1977247	+

Transcript Sequence
>GWHTAAEX002778 GCTTGATAACAACTTTGTGCTAGGATGGAAGCAGTCAATCGAGCATTTCCGAGCAATTTTGTTTCGAAATCCAAAATTTGAGGGAACTGGGAACAATAAAAACAAATGGGGGTTATGTCTAGGCGGGTGCTACCCGTCTGCGGCAGTCTCTGTTGTTTCTGCCCGTCGTTGAGGACGAGATCCCGCCAACCTGTTAAGCGATACAAAAAGCTGATTGCGAATATCTTTCGTCGCTCTCAGGATGCAAAACCAAATGAAAGGTTGATGGTAAAGCTCTGCGAGTACACCTTCAAAAATCCGATGCGGATACCTGAGATTACAGATAATCTAGAGCACAGATTTTACAAAGAACTATGTAATGAACAATTTCATTTGGTGAAGAACGTGCCTTGCATTTACAGCAAATTTTTAGCCTCATGTAAGGGACAGATGCCATTGTTTGCCATGAGCATGCTCTCCATCATACACACGCTTCTTGATCAAACCAGACAAGACGATATGCGTATCCTTGGTTGCCATACTCTTGTTGATTTTCTCAATTACCAAGTTGATAGCACATATATGTTCAACTTAGAAACTCTCATTCCAAAACTTTGTCAACTATGCCAAGAGTTTGGATGTGATAAGGTTCTTCTTTTGAGGTCAGCAGCATTAAAGGCTCTTTCTTCAATGGTTCGCTTCATGGAGACTTTTTCTCATATATCTTTGGAGTTTGATAAGATTGTCTCGGTGACTTTGGAAAATTATGAAGTTCAGATGGATTTAGAAAATGGGAATCAGTACCTGGGAAACATGCAGCTACAAAATAGTATAGCTAACGGTGGGCATTTATCATCTTTTAGAGACTCTCTGAAGGACCCATCAGCCCATCTTAACAATAAAGCAGAGTGTAATGCCTTAGTGGATGTTTCTCAATGTCCTTCATATTGGTCAAGAATTTGCTTGCAAAACATGATTAATCTTGCCAAGGAAGCAACTACAATGCGGCGTGTTTTGGAACCCATTCTTTGTTTTTTTGATGATGGTAATAATTGGTCTTCGAGCAAAGGAATCGCTTTTTCTGTTCTATCTTTGATTCAGCAAATGATGGAAAGCTCAGGACATTGCAATCATTTACTGCTGTCTTTGGTTAAGCACTTGGATCACAGGAATGTTGCCAAGGAGATTGGCCTGCAGGTCAACATAGTTAAAGTTGTCACACAGATAGCACAACAGTCACAATTGCAAGTTTCATCAACACTTGTTACTGCAATATGTGACATAATGAGACATCTTCGGAAATGCTTGCAATGTTCTATTGAAGCATTTAGTATTGGAAGGGAACCCAGTGAATGCAATTCTAATCTTCATTCTTCTTTGGAAATTTGTCTTATGGAGCTAACAAGAAAGGTAGGAGACGCTGGACCTGTCTTTGATATGATGCCTATTATGCTGGAGAACCTTCCTACTTCTATTATGGCCAGGGCAACAGTGTCTTCTGTTCTTAGAGCTGCACAAATAGCAGTTTCCGTTCCAAATGTATCTTTTAAAAGCGAGAATTTTCCAGAAGCTCTATTTCATCAACTTATCTTGGCCATGGCACACCCAGATCATGAAATAATAGTTGGAGCCTACCGAATTTTCTCTGTGGTTCTTTTACATTCCAATGTTTATCCGTGGTGTATTCATATCTCGCCAATTTCAAAGGTAGGTTATGACCAGCGGGAAACCCACTTGGTAGCTCTTTCAGGATTTGCTTCAGCTGAGACCATTTTGGAAAAATCTGGAAAAGAAGAATGTTCACTGGAGAATGACTTTGGAGAACAAAATTTCAAATTAACTGATGGAGGTACAGGTGTGGAAGAAGTCCAACGTGAAGATATTAAGCACTGTGTGATCTGCCCAGCTCCTGCGATGCCACTGTTCATGGAGCTCTCTTCGCCTTGCCTAACATCTGATGGAACATCTGAAAACGAACTTGGAAAGAAAGATTTGACATCCATAAGATTGAGTGGCTACCAGGTTGGTCTACTTCTGTCATCAGTTTGGGCCCAGGCATCTTCTCAAGAGAACACTCCTAGTGATTACGAGGGAATGGCACATATTTACTACCTTACTTTGTTGTTTTCTCGAACCAAATCATCCGATCATACGGTTCTAGTTCGAGCTTTTCAGCTAGCATTTTCTCTAAGAAGCATCTCACGTGATAATGCCAATCACTTGCAGCCATTTCATAGAAGGTCTCTGTTTACATTGTCATCATCCATGCTTCTCCTAGCAGCCAAGGCAGGAGACCTTCCAGACTTAGTTTCTTCTATTGAAGCACATATAACAGAAGAAATGGATGATCCTTACCTTCGTCTGGTTGAAGATGGCAGACTGCTGGCAGCTTTTGCAAAAGACTCTTCTAGGAAGGTTACCTATGGGTCTGAAGAAGATAAAATTGCTGCATTGAAGTTTTTAGAGACTATTAAGAGCAATGATGGTAAACTAAGAGAAATTGTGTTATCTCTTTTAGTTAAAAAGTATACCAATTTTCCTGAGCAAGAGTTATGGGGCATTAATGACCAACTCCAACAAAAATTTTCATCTGATGATGCCTTTTCTCTTGGGGCACCGATGTTCAAGGATTCTCAAAATGCTGTTTTTCTTTTTGGTCAAAAGGAAAAGGAAAATTTTGATGAGGTCGTGGTTCCTGCTCTCCTAGATGATGGTGAGCCCTTTGTTGAGGAAAGCAGAAGTTACTTAGATCAGAAGATGTCAGAATCTAAAAATTCAGTGGATGTTCTTAATGTAAACCAATTGATAGAATCCGTTCTCGAGACCGCAGAGCAGGGGACAGCCTCACCGGTCCTCTCCTCCTCTTTCAGTGTTCCATATGATGAGATAAAGAGCAGGTGTGAAGCCCTTGTTATTGGGAAGCAGCAGAAGATGTCAGTTCTTCAAAGCTTCAAGAGCCAGGGGGATGCCTCCGAAGCTGCCTTATCAATATCAGATGATCATAACAAAGATCACCTGCCAAACAAACTCATTCATTCGCTTCAACTGGGTGAGGCTGGCCATACACCATCTGAAGAAATAAAGAGTATAGATACAAAATCAAGTGAGCCTGAGCTGCCATTTAGGCTACCTCCCTCAAGCCCATATGACAAGTTCTTAAAAGCTGCAGGCTGGTGAAAATATATACTGCTAATATTGTATAGCACGGTCTGCCTGAATGTAATTGCTTGGAACAAAGTTATTCTTTTTATTCTCTTGTAATAATTTTCTGTAAGAAACAACAATAAGAGTAATCTATTTGTTTGAGGGTGTTGATTTTGTTTTATTTAGATTTTTCGATGGTGTGATGGTACAGAAATGCGTAGCATTTTAAGTGGCTAATAAATTTCTAAAAGC

Network for GWHGAAEX002778

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX002778
MGVMSRRVLPVCGSLCCFCPSLRTRSRQPVKRYKKLIANIFRRSQDAKPNERLMVKLCEYTFKNPMRIPEITDNLEHRFYKELCNEQFHLVKNVPCIYSKFLASCKGQMPLFAMSMLSIIHTLLDQTRQDDMRILGCHTLVDFLNYQVDSTYMFNLETLIPKLCQLCQEFGCDKVLLLRSAALKALSSMVRFMETFSHISLEFDKIVSVTLENYEVQMDLENGNQYLGNMQLQNSIANGGHLSSFRDSLKDPSAHLNNKAECNALVDVSQCPSYWSRICLQNMINLAKEATTMRRVLEPILCFFDDGNNWSSSKGIAFSVLSLIQQMMESSGHCNHLLLSLVKHLDHRNVAKEIGLQVNIVKVVTQIAQQSQLQVSSTLVTAICDIMRHLRKCLQCSIEAFSIGREPSECNSNLHSSLEICLMELTRKVGDAGPVFDMMPIMLENLPTSIMARATVSSVLRAAQIAVSVPNVSFKSENFPEALFHQLILAMAHPDHEIIVGAYRIFSVVLLHSNVYPWCIHISPISKVGYDQRETHLVALSGFASAETILEKSGKEECSLENDFGEQNFKLTDGGTGVEEVQREDIKHCVICPAPAMPLFMELSSPCLTSDGTSENELGKKDLTSIRLSGYQVGLLLSSVWAQASSQENTPSDYEGMAHIYYLTLLFSRTKSSDHTVLVRAFQLAFSLRSISRDNANHLQPFHRRSLFTLSSSMLLLAAKAGDLPDLVSSIEAHITEEMDDPYLRLVEDGRLLAAFAKDSSRKVTYGSEEDKIAALKFLETIKSNDGKLREIVLSLLVKKYTNFPEQELWGINDQLQQKFSSDDAFSLGAPMFKDSQNAVFLFGQKEKENFDEVVVPALLDDGEPFVEESRSYLDQKMSESKNSVDVLNVNQLIESVLETAEQGTASPVLSSSFSVPYDEIKSRCEALVIGKQQKMSVLQSFKSQGDASEAALSISDDHNKDHLPNKLIHSLQLGEAGHTPSEEIKSIDTKSSEPELPFRLPPSSPYDKFLKAAGW

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	23.260
SRP064423	SRR2545915	Juvenile tuber	24.070
SRP108465	SRR5643513	five period of Gastrodia elata	13.480
	SRR5643514	five period of Gastrodia elata	14.790
	SRR5643515	five period of Gastrodia elata	13.630
	SRR5643524	five period of Gastrodia elata	13.990
	SRR5643525	five period of Gastrodia elata	14.770
	SRR5643528	five period of Gastrodia elata	14.250
	SRR5643658	five period of Gastrodia elata	17.800
	SRR5643659	five period of Gastrodia elata	10.910
	SRR5643660	five period of Gastrodia elata	9.910
	SRR5643661	five period of Gastrodia elata	10.930
	SRR5643662	five period of Gastrodia elata	11.190
	SRR5643663	five period of Gastrodia elata	12.090
	SRR5643664	five period of Gastrodia elata	12.560
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	14.970
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	14.210
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	14.060
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	14.670
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	16.240
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	16.950
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	14.220
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	15.440
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	15.210
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	13.900
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	17.610
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	17.610
SRP279888	Gastro	Gastrodia elata tuber	12.65
	Juven	Juvenile tuber	15.59
	Mother_Gastro	Mother tuber of Gastrodia elata	17.66
	Mother_Juven	Mother tuber of Juvenile	13.63