Detail information of GWHGAAEX002789/evm.TU.scaffold_124.69
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|226229323|ref|YP_002763429.1| | 1.00E-17 | hypothetical protein GAU_3917 [Gemmatimonas aurantiaca T-27] |
| KOG | KOG1079 | 0 | Transcriptional repressor EZH1 |
| nr | gi|672187591|ref|XP_008813375.1| | 0 | PREDICTED: histone-lysine N-methyltransferase EZ3 [Phoenix dactylifera] |
| Swissprot | tr|Q8S4P4|EZ3_MAIZE | 0 | Histone-lysine N-methyltransferase EZ3 |
| trEMBL | tr|M0S2U2|M0S2U2_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P24850_001} |
| TAIR | AT2G23380 | 0 | SET domain-containing protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000131 | 2602037 | 2661666 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX002789
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00856.27 | SET | 758 | 861 | 1.40E-10 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | SET |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K11430 | EZH2 | Metabolic pathways | map01100 |
| Lysine degradation | map00310 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0005515 | Molecular Function | protein binding |
| GO:0031519 | Cellular Component | PcG protein complex |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 23.620 |
| SRR2545915 | Juvenile tuber | 25.060 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 9.730 |
| SRR5643514 | five period of Gastrodia elata | 10.770 | |
| SRR5643515 | five period of Gastrodia elata | 8.990 | |
| SRR5643524 | five period of Gastrodia elata | 10.240 | |
| SRR5643525 | five period of Gastrodia elata | 13.600 | |
| SRR5643528 | five period of Gastrodia elata | 10.810 | |
| SRR5643658 | five period of Gastrodia elata | 13.070 | |
| SRR5643659 | five period of Gastrodia elata | 11.100 | |
| SRR5643660 | five period of Gastrodia elata | 13.150 | |
| SRR5643661 | five period of Gastrodia elata | 9.740 | |
| SRR5643662 | five period of Gastrodia elata | 6.140 | |
| SRR5643663 | five period of Gastrodia elata | 9.120 | |
| SRR5643664 | five period of Gastrodia elata | 10.140 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 18.270 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 9.900 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 12.080 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 25.840 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 20.100 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 25.330 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 21.630 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 16.570 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 10.680 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 11.190 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 9.820 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 9.820 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 14.57 |
| Juven | Juvenile tuber | 21.51 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 8.50 | |
| Mother_Juven | Mother tuber of Juvenile | 15.19 |