Detail information of GWHGAAEX002793/evm.TU.scaffold_124.73


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743820312|ref|XP_010931749.1|1.77E-55PREDICTED: ocs element-binding factor 1-like [Elaeis guineensis]
Swissprottr|P24068|OCS1_MAIZE1.00E-36Ocs element-binding factor 1
trEMBLtr|M0RPJ4|M0RPJ4_MUSAM8.00E-56Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P05140_001}
TAIRAT3G624204.00E-44basic region/leucine zipper motif 53

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013127954412797095-
Transcript Sequence

Network for GWHGAAEX002793

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00170.20bZIP_123815.80E-11
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybZIP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms195.080
SRR2545915Juvenile tuber94.870
SRP108465SRR5643513five period of Gastrodia elata66.930
SRR5643514five period of Gastrodia elata75.200
SRR5643515five period of Gastrodia elata167.310
SRR5643524five period of Gastrodia elata79.760
SRR5643525five period of Gastrodia elata82.740
SRR5643528five period of Gastrodia elata174.140
SRR5643658five period of Gastrodia elata79.460
SRR5643659five period of Gastrodia elata74.200
SRR5643660five period of Gastrodia elata54.200
SRR5643661five period of Gastrodia elata49.540
SRR5643662five period of Gastrodia elata76.020
SRR5643663five period of Gastrodia elata53.170
SRR5643664five period of Gastrodia elata77.990
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_190.770
SRR6049655Rhizomagastrodiae_C368-T10_good_165.160
SRR6049656Rhizomagastrodiae_C368-T07_good_181.490
SRR6049657Rhizomagastrodiae_C368-T07_good_198.880
SRR6049658Rhizomagastrodiae_C368-T04_good_1111.370
SRR6049659Rhizomagastrodiae_C368-T04_good_1150.990
SRR6049660Rhizomagastrodiae_C368-T01_good_1149.600
SRR6049661Rhizomagastrodiae_C368-T04_good_1104.600
SRR6049662Rhizomagastrodiae_C368-T01_good_177.840
SRR6049663Rhizomagastrodiae_C368-T01_good_1154.330
SRR6049664Rhizomagastrodiae_C368-T10_good_161.970
SRR6049665Rhizomagastrodiae_C368-T10_good_161.970
SRP279888GastroGastrodia elata tuber 93.18
JuvenJuvenile tuber29.92
Mother_GastroMother tuber of Gastrodia elata 635.66
Mother_JuvenMother tuber of Juvenile 138.29