Detail information of GWHGAAEX002794/evm.TU.scaffold_124.76


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG07739.00E-56Transcription factor MEIS1 and related HOX domain proteins
nrgi|371767724|gb|AEX56217.1|5.81E-85knotted-like 2 protein [Dactylorhiza fuchsii]
Swissprottr|Q9FP29|KNOS1_ORYSJ1.00E-70Homeobox protein knotted-1-like 1
trEMBLtr|H2EYP7|H2EYP7_9ASPA2.00E-85Knotted-like 2 protein {ECO:0000313|EMBL:AEX56217.1}
TAIRAT1G705109.00E-56KNOTTED-like from Arabidopsis thaliana 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013129055792937987+
Transcript Sequence

Network for GWHGAAEX002794

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03790.12KNOX132732.80E-20
PF03791.12KNOX2891354.20E-23
PF03789.12ELK1942151.20E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding
GO:0005634Cellular Componentnucleus

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.630
SRR2545915Juvenile tuber15.560
SRP108465SRR5643513five period of Gastrodia elata12.610
SRR5643514five period of Gastrodia elata11.980
SRR5643515five period of Gastrodia elata11.880
SRR5643524five period of Gastrodia elata12.690
SRR5643525five period of Gastrodia elata11.570
SRR5643528five period of Gastrodia elata12.390
SRR5643658five period of Gastrodia elata16.170
SRR5643659five period of Gastrodia elata16.200
SRR5643660five period of Gastrodia elata19.600
SRR5643661five period of Gastrodia elata15.190
SRR5643662five period of Gastrodia elata15.910
SRR5643663five period of Gastrodia elata16.860
SRR5643664five period of Gastrodia elata17.240
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.680
SRR6049655Rhizomagastrodiae_C368-T10_good_111.830
SRR6049656Rhizomagastrodiae_C368-T07_good_117.870
SRR6049657Rhizomagastrodiae_C368-T07_good_115.190
SRR6049658Rhizomagastrodiae_C368-T04_good_118.590
SRR6049659Rhizomagastrodiae_C368-T04_good_117.090
SRR6049660Rhizomagastrodiae_C368-T01_good_115.040
SRR6049661Rhizomagastrodiae_C368-T04_good_118.310
SRR6049662Rhizomagastrodiae_C368-T01_good_112.620
SRR6049663Rhizomagastrodiae_C368-T01_good_114.350
SRR6049664Rhizomagastrodiae_C368-T10_good_114.600
SRR6049665Rhizomagastrodiae_C368-T10_good_114.600
SRP279888GastroGastrodia elata tuber 18.69
JuvenJuvenile tuber24.60
Mother_GastroMother tuber of Gastrodia elata 14.25
Mother_JuvenMother tuber of Juvenile 15.20