Detail information of GWHGAAEX002797/evm.TU.scaffold_124.79


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|42524005|ref|NP_969385.1|3.00E-63multidrug ABC transporter permease/ATPase [Bdellovibrio bacteriovorus HD100]
KOGKOG00544.00E-112Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily
nrgi|743888512|ref|XP_010910638.1|2.53E-145PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member 3-like, partial [Elaeis guineensis]
Swissprottr|Q7GB25|AB5C_ARATH1.00E-112ABC transporter C family member 5
trEMBLtr|K4BYF8|K4BYF8_SOLLC9.00E-141Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc05g014390.2.1}
TAIRAT1G041204.00E-112multidrug resistance-associated protein 5

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013130300813032528+
Transcript Sequence

Network for GWHGAAEX002797

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00005.26ABC_tran542016.20E-29
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016887Molecular FunctionATPase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.280
SRR2545915Juvenile tuber26.680
SRP108465SRR5643513five period of Gastrodia elata13.060
SRR5643514five period of Gastrodia elata4.570
SRR5643515five period of Gastrodia elata8.140
SRR5643524five period of Gastrodia elata5.560
SRR5643525five period of Gastrodia elata3.550
SRR5643528five period of Gastrodia elata1.900
SRR5643658five period of Gastrodia elata6.920
SRR5643659five period of Gastrodia elata16.490
SRR5643660five period of Gastrodia elata11.330
SRR5643661five period of Gastrodia elata8.410
SRR5643662five period of Gastrodia elata18.420
SRR5643663five period of Gastrodia elata22.530
SRR5643664five period of Gastrodia elata28.550
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.840
SRR6049655Rhizomagastrodiae_C368-T10_good_124.840
SRR6049656Rhizomagastrodiae_C368-T07_good_122.890
SRR6049657Rhizomagastrodiae_C368-T07_good_127.830
SRR6049658Rhizomagastrodiae_C368-T04_good_115.100
SRR6049659Rhizomagastrodiae_C368-T04_good_113.460
SRR6049660Rhizomagastrodiae_C368-T01_good_115.910
SRR6049661Rhizomagastrodiae_C368-T04_good_128.180
SRR6049662Rhizomagastrodiae_C368-T01_good_18.580
SRR6049663Rhizomagastrodiae_C368-T01_good_14.610
SRR6049664Rhizomagastrodiae_C368-T10_good_15.280
SRR6049665Rhizomagastrodiae_C368-T10_good_15.280
SRP279888GastroGastrodia elata tuber 26.23
JuvenJuvenile tuber7.29
Mother_GastroMother tuber of Gastrodia elata 6.07
Mother_JuvenMother tuber of Juvenile 5.49