Detail information of GWHGAAEX002803/evm.TU.scaffold_125.5


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG24732.00E-117RNA polymerase III transcription factor (TF)IIIC subunit
nrgi|695067651|ref|XP_009380747.1|0PREDICTED: general transcription factor 3C polypeptide 5-like isoform X1 [Musa acuminata subsp. malaccensis]
trEMBLtr|M0RKS4|M0RKS4_MUSAM5.00E-175Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P23490_001}
TAIRAT5G244502.00E-117Transcription factor IIIC, subunit 5

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000122302598364034-
Transcript Sequence

Network for GWHGAAEX002803

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module8

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09734.8Tau95473602.70E-50
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms352.580
SRR2545915Juvenile tuber199.080
SRP108465SRR5643513five period of Gastrodia elata22.870
SRR5643514five period of Gastrodia elata27.790
SRR5643515five period of Gastrodia elata25.790
SRR5643524five period of Gastrodia elata29.110
SRR5643525five period of Gastrodia elata18.380
SRR5643528five period of Gastrodia elata20.470
SRR5643658five period of Gastrodia elata19.410
SRR5643659five period of Gastrodia elata19.680
SRR5643660five period of Gastrodia elata21.490
SRR5643661five period of Gastrodia elata20.230
SRR5643662five period of Gastrodia elata19.860
SRR5643663five period of Gastrodia elata18.710
SRR5643664five period of Gastrodia elata19.160
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.740
SRR6049655Rhizomagastrodiae_C368-T10_good_131.170
SRR6049656Rhizomagastrodiae_C368-T07_good_121.640
SRR6049657Rhizomagastrodiae_C368-T07_good_128.710
SRR6049658Rhizomagastrodiae_C368-T04_good_128.560
SRR6049659Rhizomagastrodiae_C368-T04_good_131.990
SRR6049660Rhizomagastrodiae_C368-T01_good_127.350
SRR6049661Rhizomagastrodiae_C368-T04_good_127.820
SRR6049662Rhizomagastrodiae_C368-T01_good_120.170
SRR6049663Rhizomagastrodiae_C368-T01_good_122.260
SRR6049664Rhizomagastrodiae_C368-T10_good_125.220
SRR6049665Rhizomagastrodiae_C368-T10_good_125.220
SRP279888GastroGastrodia elata tuber 32.42
JuvenJuvenile tuber44.61
Mother_GastroMother tuber of Gastrodia elata 30.99
Mother_JuvenMother tuber of Juvenile 46.31