Gene detail

Detail information of GWHGAAEX002804/evm.TU.scaffold_125.8

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672120025\|ref\|XP_008783264.1\|	5.42E-56	PREDICTED: protein EMBRYONIC FLOWER 1-like [Phoenix dactylifera]
Swissprot	tr\|Q9LYD9\|EMF1_ARATH	7.00E-10	Protein EMBRYONIC FLOWER 1
trEMBL	tr\|M0S6F8\|M0S6F8_MUSAM	2.00E-24	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr2P09170_001}
TAIR	AT5G11530	2.00E-09	embryonic flower 1 (EMF1)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000122	542759	576175	-

Transcript Sequence
>GWHTAAEX002804 AAGGTACAACGCTACACTTGCTTCTCCTTTCCCAATTCGTTGCGTCTGACCTTCTGTTGTCTGCAGTTACCGGACTGAAGCATATCTCAGCTACTCCGGCGCCCGCGCAGATCTCTCTTCGTTACTCGGTAGCTGAAACTATAACTTTCCTTCTCCCAGTCTGAGTACTCCCCCCGACACCCCCCCCCCCCCCTTCCGTCACCTCCGTCCCCTCCCCTCTCTATTCGAAGTTAAGGAGGGCGGTGATTTATGAAGGTTGTGCTGGACAGTAACACTTTAATATTATTTTCATGTGATGGCATTTAGATTTGTAGAGAAACCTCATTGCGGATATGAAAAAACTGCCATCATTTCCAATGTCAAACATTCTCCAGTAATATCAGAAACTACTGAGATTACTAAAGCCGATGATAATAAACGGCCAAATGAATGCAAGCATTTTACTATTCGTGGATATGTTGCTGAGGTTCGTAAGAGAAATACAAAAATTTGTTGGCCATTTTTGCTTCATAAAAATGCATCACCTGAAAGTCCCAATGCGTTTCCCCCACTACCTGTTGCTAAATTTAGGTGGTGGGGTTGCCAGCATTGTGTATGCGAGATCATTGCTGCTACAACCCACATAACTACCGGAGGAGCTATGAGCACCCAAAATCAAATTCTGAAAAGTACTGCTAGATCATTGCTGAGAAATATTACCAAAACATATGAGCTTGATACAAGACAAATGCTGCCTAAATTCCCTCAAATTTCTTTAATAAACAACCAAAAAGAAATATTTAAGACAAATGATTGTTCTGTTAAGGCTGGAAAGGAAAAAAACGAATGCCTACGAAAGGGTTTAATAAAAGAAGGTTTCCAGAAATGCATGGATGGTTTAGATCATTCAAATGAGATTCAAAATGCTGTAGGTGAAGCTAAATGTGTTCCTATTGGACGCATTACTATCAATAAAGGAAAAAGAAAAGAAAAAAAAAACTCTGTTAGCAGGAAAAAAATAGGGCTTGCCTATCTAAAAGATGTTTTTGACACTGCCTTAGTCAAACATGAGGAAACTAAACTATTTGAGATTGGTCATTCCAAGATGCTTTGTGGTGATGCCATATCAAATAGAATCAAGTTTGCATTATGTAGATCAAATGAAGATAATAAAAATGAAAGAAGAAGGGCTGAAAAGATATCAAGGAATTGTTTTAGTAAAGAACGTGCAAATACAGATTTGTCTGTCAGAAACAACAATGTTTTTGATGCTTATTCGGCTCATACAATGTTTCTTGGTGCCTGTTGTCAGGACAATCTAAACAATGGAGCATCAGTTGGCGGCTCGATGCACATCCGCATGACTGATGGTAATCGTGGAATTGAAAATAAATTTGAAAACATGCACAGTAAAAAGATTAAAAAAGTTCGTCTTTTGGAAGATATTATAAGAAATGAAGTACAGCATTCAACTGGAAATATCTGTAGTCTGGATGGAGATGCAGATATTAGGCAGCATGATTTTTTAAGAAGTGTTATGTGGAAGGAGAAAATACTGCTTTTAAATCACTCAAGCTATGATGTTCATCAGAGTAATGCCTCGAACTTTTTCAGAAGTAATGGCAAGTTCCAAAAGTCTACGGAGAATGAAGAAAACATGGATGATGCAGTTCTCTGTCTAGGTCAGATAAATGATTGTAGTCAACAATTTAATCAACCAAAATCAGTTAAAAGGAAGAACAGACATGAAAACCTATCTGATCAAGCTGAGCGGCCATTGCTCATGAGCTGGCAAAAGAAAATTCCTAATAGGGCAAATCTTTCTGATAGAGAAACAAAAGCTGATCATATCAGCGGTAGCTTTTGTTTATCCAGAATTTCTTCTGATTTATCACACGGAATGAACTTGGGTGTAAATATCAGAGATAATGCCATAAGAATACACAAACAGAATTCTGTATTTCGTAAGAAAAAAACTTTAGCACCCAAAGATGACTTTCTGGCTTCAAGTTTCATAATTGGTGAAGAAGTAGAGTCTAATAACTTCACTTCCCAAGATGTTAGTTTAAAAAAAGCTGTCACTATTGAGAGAACGAAGCAATGCAGTGTAGAAATTTCTGATGGTTCAGGAAATGCTATTTCACATAGCACCAGAAACAAAAGGCCCCTTGACGGCAGATTGAAAACTAACCGGACAAAGAAGAAAGCTTCTTTGGAGACGAGGGAAAAAGTATCAACGTGCCTAAGTAGCGTGAGAACTACTGAACATGAATCCCATGATGAAATTCCCATGGATATTGTTGAATTCCTAGCTAGAAATCTGCACGACCGATGTCACCTTGTGGCTGGATCCGATGCTATAAACAAAAGTAAGTTTCCTTCAATGACCGAAAGCATTAAAAATATCCGTGATATCAATTCCTCCCAATTAAACAGAGACACTGTAATAAATGCTGATCATGGGAATCTTTCTTGCCAAAAGTTTCAAGTCTACAACAAAAGTTTTGATGTTTTAACTACAATCCAATGTAATAGGGAGATGGAACACGAGATGAAAGCTTGCAGTTGTTCAATCTATGGAAAGAAAAAGCTTCAAATTGACTTGAATAAACAGTATAGTGATTCTCTTCTTGGTGAATCAGGATCTTGTAACTTGGACACTAATGGTAATTGTCATCAGCTGAATTTTTCCTGTTGTAGAAGTAATAATATATTCTCTTCACGGTCATTTCTTGAGGATCAGATGGGTTCAGTGGCTGGGGTCAAAAGCCGTTGTTTTGATAATATAAATTTTTCATCAGTTCTTGCAGGGGATTTACACTTGTCTAATCAGCTGAATGATTATGAGAGGCAAAGAAACCAAGTTGAGAAGCATCACCGTTGGATCTTTTCCCCTGTATCTCCAAATGCTTCATCCTTCCTGAGCTTAACAAATGGCTGTCATTCAAGTATAATGTCTGCAAATCTATACAGTAATGACTCCATATCTGCTCTAAATTTGCTAAGGTTGATGGATCAAGCTGCTGGTAAACCTCTGCATCATTCTCATAATTATTCAGGGTTTATCAAGGAGACTAACAAGCATGTTAATGGTCTGTATAATGAGTCGCAAGAAGAATATGACAACCTAGAATTGGAACGTTGCATATATCCTATGGAAATTGTTAAATCAAGTACGTGCCAACAGCCAAAAAGTTCGTGCTCGGTTTTCCGGCCACTTCCCAGAATTGGAGTTTTAGGACCTTCTCTACAAAATGAAATCCTTAGTTTTTCAAAGTGCAGTCGATTAACATCTAAAAATTCCAATGAATTTAAGACAGATGTGAATGAAAAATTAGAACCTTTAAGCTTGAACCCAAACACTTTGGCCTGGAACTCGTGTAACTCTTTTTTTAGTTGTAAATGTTCCGGAAGGATATGCCCAGACGGAGGGTCTGGTAGGTGCTTCTTCTCAAATACAAGAAGAAATTCTGTAGCAAGAAGTGGTGCCCCTCAAGTTGAGTTGAATGACAAGGTTGATATTCTTCTTCCCATTAGAAGCTTTTGTAAGATGGATATTTGTGCTGTTAATAGAAATCCAGCTGATTTTACTGTGCTTGATGAAAACAATGAGTATATGATAGATGCCAAGGAACTAAAGCCAGAATCTGCGCAGCCATAGGAAAACCTTCGAAATCTTGTACTTGGACAGAAGAAGCAAAGAACTATGAAGCTCGATGATCTGAAAGCATTTCCAATGAGATGAAGTTGTGCATCTAATTAATATTAAACTTTTGTTCTTTGATGAGTTACAGTGACTAGCAAATGAAACTCCATATTGTCAATATGTGCATACTTTTTATATTAGTTTTTTGTAAAGCAGTTTTCATCTAGGTCCAAGCAGCCTTGAAGAAATAGAATAATGGCAGTTTGGGCGTCCAATTATGCAAAAAACAGCTCTGGAACTTTCTTTGTGATGCATAAGTATATAAGTTAGCTGAATGTGTGATATAAAAGTTTGAAATTGCCCGTGAGCAATAAGTACCATTTGTTGGCCTTGCTTAAATTGCAGAATAATAATTTTCTTGGATCTACAAATTTTAAGTACAGAGGTTTGGTGTACAGTGGATAGTCCTTCAGTCATGTACAATGTCAGCAATAATATTGTTTTTGGCCGGCTGCATTCAAGAGTATATGCTTATCAAGGTTATTATGTCAGTGATCTCAGTTTCTCTTGATTTTTTGCTTTAAAAATTTGAAGCTTTTGATCCTGCTGCAACAGTTACGTATCAATGTATTGCTTCATGAATATAAACTCTGTATGAAGCTTTATTCTCATATTTCAATTATGAAGATGAAATAATACAGTAAATTTAGAAGGTATATCATCTCTCGTATTCCAAGATTTTGCTTGATAATGTTTCTGTAGTTTGATTAATATGCTGTTTCCTTTGAAATAAAATTCTTTCTTTTTCATTCCTCTGAGCACATTTTATAAATGCTAGCCTAAATATGAAACTTCAAACTTTTTTGTGAATTTTGGCATCATAAAACTGTGACTTCAGCCATCTTCAACGTCTGTATGATGAAGTCAGTTCTCTTATGCAGTTTGTTTAATTGGATTATTTGGGAATACGGCACCTGCTTGTTTCATCCTGCTGCTATGGCTATCCATATAATTCAGGTTATATGCTTGCTGTAATAGTTTTGCAACTTAGTTTCAATTTTTTTCTACTTCTAGCTTTTGAAAAATTTACTTGTATGAATTAATTGAGAAATTTAAATGAGGATGATTTCACTTTTTTAGAAAT

Network for GWHGAAEX002804

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX002804
MAFRFVEKPHCGYEKTAIISNVKHSPVISETTEITKADDNKRPNECKHFTIRGYVAEVRKRNTKICWPFLLHKNASPESPNAFPPLPVAKFRWWGCQHCVCEIIAATTHITTGGAMSTQNQILKSTARSLLRNITKTYELDTRQMLPKFPQISLINNQKEIFKTNDCSVKAGKEKNECLRKGLIKEGFQKCMDGLDHSNEIQNAVGEAKCVPIGRITINKGKRKEKKNSVSRKKIGLAYLKDVFDTALVKHEETKLFEIGHSKMLCGDAISNRIKFALCRSNEDNKNERRRAEKISRNCFSKERANTDLSVRNNNVFDAYSAHTMFLGACCQDNLNNGASVGGSMHIRMTDGNRGIENKFENMHSKKIKKVRLLEDIIRNEVQHSTGNICSLDGDADIRQHDFLRSVMWKEKILLLNHSSYDVHQSNASNFFRSNGKFQKSTENEENMDDAVLCLGQINDCSQQFNQPKSVKRKNRHENLSDQAERPLLMSWQKKIPNRANLSDRETKADHISGSFCLSRISSDLSHGMNLGVNIRDNAIRIHKQNSVFRKKKTLAPKDDFLASSFIIGEEVESNNFTSQDVSLKKAVTIERTKQCSVEISDGSGNAISHSTRNKRPLDGRLKTNRTKKKASLETREKVSTCLSSVRTTEHESHDEIPMDIVEFLARNLHDRCHLVAGSDAINKSKFPSMTESIKNIRDINSSQLNRDTVINADHGNLSCQKFQVYNKSFDVLTTIQCNREMEHEMKACSCSIYGKKKLQIDLNKQYSDSLLGESGSCNLDTNGNCHQLNFSCCRSNNIFSSRSFLEDQMGSVAGVKSRCFDNINFSSVLAGDLHLSNQLNDYERQRNQVEKHHRWIFSPVSPNASSFLSLTNGCHSSIMSANLYSNDSISALNLLRLMDQAAGKPLHHSHNYSGFIKETNKHVNGLYNESQEEYDNLELERCIYPMEIVKSSTCQQPKSSCSVFRPLPRIGVLGPSLQNEILSFSKCSRLTSKNSNEFKTDVNEKLEPLSLNPNTLAWNSCNSFFSCKCSGRICPDGGSGRCFFSNTRRNSVARSGAPQVELNDKVDILLPIRSFCKMDICAVNRNPADFTVLDENNEYMIDAKELKPESAQP

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	21.480
SRP064423	SRR2545915	Juvenile tuber	19.060
SRP108465	SRR5643513	five period of Gastrodia elata	10.790
	SRR5643514	five period of Gastrodia elata	10.400
	SRR5643515	five period of Gastrodia elata	10.140
	SRR5643524	five period of Gastrodia elata	10.100
	SRR5643525	five period of Gastrodia elata	14.540
	SRR5643528	five period of Gastrodia elata	14.840
	SRR5643658	five period of Gastrodia elata	19.690
	SRR5643659	five period of Gastrodia elata	11.520
	SRR5643660	five period of Gastrodia elata	13.000
	SRR5643661	five period of Gastrodia elata	10.850
	SRR5643662	five period of Gastrodia elata	11.440
	SRR5643663	five period of Gastrodia elata	13.870
	SRR5643664	five period of Gastrodia elata	14.390
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	11.510
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	11.050
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	9.820
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	13.920
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	12.420
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	15.640
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	12.620
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	12.140
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	7.670
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	8.040
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	9.520
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	9.520
SRP279888	Gastro	Gastrodia elata tuber	10.63
	Juven	Juvenile tuber	10.50
	Mother_Gastro	Mother tuber of Gastrodia elata	7.43
	Mother_Juven	Mother tuber of Juvenile	8.42