Detail information of GWHGAAEX002805/evm.TU.scaffold_125.10
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|18978046|ref|NP_579403.1| | 9.00E-08 | hypothetical protein PF1674 [Pyrococcus furiosus DSM 3638] |
| KOG | KOG1716 | 5.00E-58 | Dual specificity phosphatase |
| nr | gi|743828907|ref|XP_010934001.1| | 5.62E-76 | PREDICTED: dual specificity protein phosphatase 1-like [Elaeis guineensis] |
| Swissprot | tr|Q9ZR37|DUS1_ARATH | 1.00E-58 | Dual specificity protein phosphatase 1 |
| trEMBL | tr|M0TJE9|M0TJE9_MUSAM | 2.00E-74 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P21120_001} |
| TAIR | AT3G23610 | 5.00E-58 | dual specificity protein phosphatase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000122 | 672556 | 701084 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX002805
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00782.19 | DSPc | 38 | 167 | 1.00E-30 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006470 | Biological Process | protein dephosphorylation |
| GO:0016311 | Biological Process | dephosphorylation |
| GO:0016791 | Molecular Function | phosphatase activity |
| GO:0017017 | Molecular Function | MAP kinase tyrosine/serine/threonine phosphatase activity |
| GO:0008138 | Molecular Function | protein tyrosine/serine/threonine phosphatase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 9.360 |
| SRR2545915 | Juvenile tuber | 7.020 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 15.240 |
| SRR5643514 | five period of Gastrodia elata | 12.290 | |
| SRR5643515 | five period of Gastrodia elata | 11.290 | |
| SRR5643524 | five period of Gastrodia elata | 15.310 | |
| SRR5643525 | five period of Gastrodia elata | 22.380 | |
| SRR5643528 | five period of Gastrodia elata | 18.750 | |
| SRR5643658 | five period of Gastrodia elata | 22.880 | |
| SRR5643659 | five period of Gastrodia elata | 13.450 | |
| SRR5643660 | five period of Gastrodia elata | 12.940 | |
| SRR5643661 | five period of Gastrodia elata | 12.510 | |
| SRR5643662 | five period of Gastrodia elata | 14.800 | |
| SRR5643663 | five period of Gastrodia elata | 14.810 | |
| SRR5643664 | five period of Gastrodia elata | 10.390 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 13.170 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 11.940 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 15.790 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 9.900 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 14.650 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 15.820 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 11.850 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 13.740 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 14.570 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 15.260 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 18.880 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 18.880 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 15.77 |
| Juven | Juvenile tuber | 20.90 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 15.33 | |
| Mother_Juven | Mother tuber of Juvenile | 14.78 |