Detail information of GWHGAAEX002810/evm.TU.scaffold_125.18


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672133030|ref|XP_008790116.1|2.33E-17PREDICTED: DNA topoisomerase 1-like [Phoenix dactylifera]
trEMBLtr|M0U8Q8|M0U8Q8_MUSAM2.00E-17Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP12990_001}
TAIRAT5G600303.00E-17Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000012212528821254240-
Transcript Sequence

Network for GWHGAAEX002810

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms44.210
SRR2545915Juvenile tuber42.350
SRP108465SRR5643513five period of Gastrodia elata43.430
SRR5643514five period of Gastrodia elata36.340
SRR5643515five period of Gastrodia elata42.320
SRR5643524five period of Gastrodia elata38.680
SRR5643525five period of Gastrodia elata50.590
SRR5643528five period of Gastrodia elata49.760
SRR5643658five period of Gastrodia elata52.410
SRR5643659five period of Gastrodia elata47.380
SRR5643660five period of Gastrodia elata49.810
SRR5643661five period of Gastrodia elata45.180
SRR5643662five period of Gastrodia elata51.130
SRR5643663five period of Gastrodia elata45.600
SRR5643664five period of Gastrodia elata48.180
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_140.380
SRR6049655Rhizomagastrodiae_C368-T10_good_129.320
SRR6049656Rhizomagastrodiae_C368-T07_good_137.750
SRR6049657Rhizomagastrodiae_C368-T07_good_153.730
SRR6049658Rhizomagastrodiae_C368-T04_good_157.650
SRR6049659Rhizomagastrodiae_C368-T04_good_168.670
SRR6049660Rhizomagastrodiae_C368-T01_good_160.820
SRR6049661Rhizomagastrodiae_C368-T04_good_154.310
SRR6049662Rhizomagastrodiae_C368-T01_good_129.110
SRR6049663Rhizomagastrodiae_C368-T01_good_146.200
SRR6049664Rhizomagastrodiae_C368-T10_good_129.020
SRR6049665Rhizomagastrodiae_C368-T10_good_129.020
SRP279888GastroGastrodia elata tuber 47.83
JuvenJuvenile tuber64.69
Mother_GastroMother tuber of Gastrodia elata 34.48
Mother_JuvenMother tuber of Juvenile 47.38