Gene detail

Detail information of GWHGAAEX002817/evm.TU.scaffold_125.27

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0048	2.00E-82	Transcription factor, Myb superfamily
nr	gi\|693302216\|gb\|AIS35927.1\|	5.85E-107	MYB transcription factor 10 [Phalaenopsis equestris]
Swissprot	tr\|Q8LPH6\|MYB86_ARATH	9.00E-82	Transcription factor MYB86
trEMBL	tr\|A0A096ZX77\|A0A096ZX77_PHAEQ	2.00E-107	MYB transcription factor 10 {ECO:0000313\|EMBL:AIS35927.1}
TAIR	AT1G09540	2.00E-82	myb domain protein 61

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000122	1816625	1819129	-

Transcript Sequence
>GWHTAAEX002817 TGGCCGAAAGAGATCTCTGCTTTCCAATTCAGAGTAGCAAATGTACAGCCGCCACAATTTGTTTCTTACTATTAAAGAGAAGAAAACAGCTTTTTTTTTGTGTTCTCTGAATTCTCTCTCTTCATTCAGTTAACTTTGGAAAGTTAATCCCACTAAGCATTGCTTCTCATTCACCAACTGTTTTGATAAAACTGTGTGCAAAGAGAACAGACCCCAATAGAAAAAGGAGAAGGAAAGAAACTACAGCTGACTGTGGGTCTCAGCCATACCTTTCTCTCACTCTTCACATCTCCAGAAACAGCTTCAGCTTCTTTGCTTCTCTTTAGATAATGGGGAGGCACTCTTGCTGCTTTAGGCAGAAGCTGAGAAAGGGATTGTGGTCTCCAGAAGAGGATGAGAAGCTTCTGCAGCATATCTCCAAAAACGGGCACGGTTGCTGGAGCTCTGTTCCTAAGCTTGCAGGCTTGCAAAGATGTGGCAAAAGCTGCAGGCTGAGATGGATAAACTATCTCAGGCCTGATTTGAAGAGAGGAACCTTTTCACCCCAGGAGGAGAACATGGTCATTGAGCTTCATGCTGTTTTAGGGAACAGGTGGTCACAGATTGCAGCACAATTACCTGGAAGAACTGATAACGAGATAAAGAATTTGTGGAATTCTTGCATTAAGAAGAAGCTGAGGCAGAGAGGCATAGATCCCATTACACATAAGCCATTCACAGAAGTTCAAGAACAGCAAATTCTTCAGCAGTCTCATCCTCTTAACAGTTCCGAATGGTCAGCCAGTTCTTCAGCTGCCAATTACTTTTCTCTTTCAAATCTAGCTTTCAGCCCCGAGTGCGGAAGTGAAATTAGCCAAATCAAGCCACTTTGGCTCAGCCAAGGCGGCAAGATTCCCAGCACAGACAGCTCCAACTCAGAGGGCAATTTTAATTCTATGACGCTAGTGCCTTTAACTAGTTTTCTCACAGAGAATTCTCTCTGTTGGGAGTCTGGGAGCACTGATACTCTGCTTTCTCGGCAGCATCTCAAATGGGAAGAATATATTTATGGGCCTACTCCGCCATTCGCTGAGTTTCAGAGCAATAAAGATGAGCCGTGCAATGTGATAAAAGAAGATGAACAGTTTGGTGTTGAAGGCTTTAGTGTTTAGCTGTAGAATCAGCCGAAACAACAACAGCACAGCGACAGCAGGCTTTTGATACGTATGCAAAGAATTAAAGAGACTGTTAAAAAAGGGGCTATTTTTAATAAACCTGCCCACTGCTTTTTCTTTTGGAGATCATGAAGAATTAGATGGAGAGATCCTTCTCATATAAGTTCAGCGTTCAGCATACAGCGTAAGCGCTAGTTATTATGGTAAGTTTTGTGTAGCTTAGGTGCCCTCCTCCCTCACATGTCTGAATCACTAAATAATAATGCTCACGTTTCATTGCCTTCTCCACTTTACTGAAATTACTCTACAAAAGGCTTTCCATTTCCACAGATCAACCAAATATACGACTCCTGCTCTCCATGAAACAAGAGAACACGAGAGCAAATTGTCAAATCCAAATTATGGAGTAAGCGTGTACTAGGAAAGTGACAACTCTAACTTGATAATCGGAATAAAGTCCAGAGACGTCTCAAATTATCATCTTTTGATTCTCTTGTCCTCAAGTGCAAGCAATATTTTTAGATGGGCCAACTATAGTATTAAATTTTATGTCAGTGTCCTTTACATGATGGAAGAGGTGCTTAAAATAACCAATAATATTGAGGAAGCCTTTTCAAGAGAATAATGCTGCCTACGACTGTAAAATGGCTAAACCATTTTCTTTTCCTTCTCTTCGGCTCCATTTATATCCAAATTATAGAACAAGAGAGGCAACCAAACTCTCACGAATTTTTTCATTGATTTATAGAGTTGTGATTAACTTTTTGAGCCTTCTGCATTAATAGTAACATCTTGCACAATTAGTTGATCTAATCCTCACTCAACTGAGCATGGGATCCCTTAATCATGGATCCTTAATCTAATTGACTAATTATGATTACATGATAGTGTGCTATTTTTTGCCATAGAGTAAGGCAAAAACCAAAAAGGAAAGCATGTAGACAAAGTACTCATTAAATAGTTGTTTAACTTGTAGTTTTGTACCAATCATATATTTCTTACAATTGAAGGCTATTCATAGCTTAATGCCTCAAAATATTATAAACAAAACAAAAAAAATTATGAAATACCTGACAATTCATTTGTCTCAACTACAACAATTAATGATGACCATTTAGTCCAAATGTTAGCTAAAATTTTTTGAATGCATGTTTTAAAATGTTCCACATTGCAACTTGTAACAATTTTGGTAGCTATTTCTTTTATCC

Network for GWHGAAEX002817

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00249.30	Myb_DNA-binding	14	61	1.70E-15
PF00249.30	Myb_DNA-binding	67	110	1.50E-12

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	MYB

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0003677	Molecular Function	DNA binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	38.090
SRP064423	SRR2545915	Juvenile tuber	24.510
SRP108465	SRR5643513	five period of Gastrodia elata	20.290
	SRR5643514	five period of Gastrodia elata	21.160
	SRR5643515	five period of Gastrodia elata	20.660
	SRR5643524	five period of Gastrodia elata	24.970
	SRR5643525	five period of Gastrodia elata	6.120
	SRR5643528	five period of Gastrodia elata	7.980
	SRR5643658	five period of Gastrodia elata	0.870
	SRR5643659	five period of Gastrodia elata	20.510
	SRR5643660	five period of Gastrodia elata	24.740
	SRR5643661	five period of Gastrodia elata	21.060
	SRR5643662	five period of Gastrodia elata	34.610
	SRR5643663	five period of Gastrodia elata	27.580
	SRR5643664	five period of Gastrodia elata	45.420
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	25.280
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	14.890
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	21.820
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	29.400
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	25.700
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	29.940
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	28.430
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	23.530
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	13.750
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	17.810
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	10.340
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	10.340
SRP279888	Gastro	Gastrodia elata tuber	29.59
	Juven	Juvenile tuber	67.47
	Mother_Gastro	Mother tuber of Gastrodia elata	84.07
	Mother_Juven	Mother tuber of Juvenile	70.90