Detail information of GWHGAAEX002831/evm.TU.scaffold_125.50
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG4441 | 8.00E-148 | Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes |
| nr | gi|672116257|ref|XP_008781284.1| | 0 | PREDICTED: BTB/POZ domain-containing protein At2g30600 isoform X1 [Phoenix dactylifera] |
| Swissprot | tr|Q8LEV3|Y2060_ARATH | 8.00E-146 | BTB/POZ domain-containing protein At2g30600 |
| trEMBL | tr|M0U273|M0U273_MUSAM | 4.00E-178 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P21140_001} |
| TAIR | AT2G30600 | 8.00E-148 | BTB/POZ domain-containing protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000122 | 2706532 | 2722541 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX002831
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF12248.7 | Methyltransf_FA | 127 | 225 | 2.90E-22 |
| PF00651.30 | BTB | 354 | 464 | 2.90E-19 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | TRAF |
| Ubiquitin Family | BTB |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0005515 | Molecular Function | protein binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 18.990 |
| SRR2545915 | Juvenile tuber | 13.000 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 13.650 |
| SRR5643514 | five period of Gastrodia elata | 13.410 | |
| SRR5643515 | five period of Gastrodia elata | 12.150 | |
| SRR5643524 | five period of Gastrodia elata | 14.850 | |
| SRR5643525 | five period of Gastrodia elata | 8.180 | |
| SRR5643528 | five period of Gastrodia elata | 5.850 | |
| SRR5643658 | five period of Gastrodia elata | 7.480 | |
| SRR5643659 | five period of Gastrodia elata | 13.180 | |
| SRR5643660 | five period of Gastrodia elata | 19.190 | |
| SRR5643661 | five period of Gastrodia elata | 15.590 | |
| SRR5643662 | five period of Gastrodia elata | 9.400 | |
| SRR5643663 | five period of Gastrodia elata | 13.360 | |
| SRR5643664 | five period of Gastrodia elata | 13.020 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 21.110 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 14.150 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 15.600 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 25.260 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 25.330 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 27.660 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 19.780 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 16.830 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 11.610 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 12.530 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 10.860 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 10.860 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 12.69 |
| Juven | Juvenile tuber | 16.22 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 16.36 | |
| Mother_Juven | Mother tuber of Juvenile | 20.72 |