Gene detail

Detail information of GWHGAAEX002839/evm.TU.scaffold_126.4

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|470168940\|ref\|YP_007549826.1\|	3.00E-100	putative potassium uptake protein [Azoarcus sp. KH32C]
nr	gi\|743857727\|ref\|XP_010942193.1\|	0	PREDICTED: potassium transporter 10-like [Elaeis guineensis]
Swissprot	tr\|Q9M7J9\|POT8_ARATH	0	Potassium transporter 8
trEMBL	tr\|A0A068F6H9\|A0A068F6H9_ELAGV	0	Potassium transporter {ECO:0000256\|RuleBase:RU321113}
TAIR	AT5G14880	0	Potassium transporter family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000119	376487	395982	-

Transcript Sequence
>GWHTAAEX002839 GCTTAGCAAAAAAATGGCTTTTCAAATATAAAACTCCTCTGCTCCCAAACCTGGCCGAGCTGTGGCCAAGTATGCATTCTGGATTGTCCTGCGCAAGTTGGGGTTAATGGGGTTAATATTTCAATCACAAAAGACCCAAAACTTCACCCGCACCACGTGGCCAACCATCCGTCCTGCTTTAACATCATAGGCAATAAAAAATTTGTTCCCACTCAACTCGAAAAAAAATTAATAAATAAAAATGCGCCTTTTTTCTTTACTTATTTCCCCTTTGCGAGTCCACTGGTCTGCAATTTCACCTACCAGGCTACCATTCCTCTAATCTTCTATTCTGTGTCCTTTCCCAGAACATCCTCAGGGCCAGGAACTGTTTCTTCGATTTTTTTATTCCATGGCTTCTTCTCTTTGAAGCACTCAAAACGAACCAGGGAATTAGAAAATGCAATTGCGCTCTCCAAGCGCTGCATGTCTTACCCATTCCTTTTCTGAAATTCCCATCTTTGTAATGAAAACCCACTCTCCTCTTCTCAGCACAAATTCCTCTTCGTTCATCCATGGATCTTGAAACTGGGACTCAATTCAGTACCTTTATCAAGACAGAATCATGGCGGACGGTTCTCACACTGGCCTACCAAAGCCTGGGCGTTGTGTATGGCGACCTGAGCACTTCTCCTCTGTACGTCTACAAGAGCACCTTCGCGGAAGATATTGAGCATTCGGAGACGAACGAAGAGATCTACGGAGTTCTCTCCTTCGTCTTTTGGACGCTAACTCTCATTCCTCTCCTTAAATACGTCTTCATAGTACTCCGAGCCAACGACAATGGAGAAGGAGGGACCTTTGCTCTCTACTCTCTTCTCTGCCGGCATGCTAGAGTAGGGTTTCTTCCAAATGGGCAGCTCGCAGACGAGTACCTCTCTGCTTACAAGAAGACTGACGACAGACTGAGCCGCATCAGCCGGGAGTCCATTAACGGAGAGGCCGGTGTTCAAGATTGTCGGGTCAATACAGCCATTAAAGTAAAGAGAATCCTTGAAGAAAACCGTGTTCTTCAACGCCTTCTATTGATTCTTGCTCTGATTGGAGCATGTATGGTTATTGGTGATGGAGTTCTTACCCCTGCACTCTCTGTTTTCTCGGCTGTCTCTGGGCTGGAGCTTTCCATGGCCAAGGAGCATCATAAATATGTTGAGGTTCCTCTTGCGTGTGTCATCTTGATTTGCTTGTTTGCCTTGCAACATTTTGGTACTCACCGAGTAGGGTTTCTTTTTGCACCAATTGTTATAACGTGGCTTTTATGCATCAGCATGATTGGTGTATATAACATTTTCTATTGGAACCCAAATATATATCAAGCATTGTCTCCTTACTATATGTACAAGTTCTTGAAGAAGACACAAAAGGGAGGATGGATGTCTTTGGGCGGAATCCTGTTGTGTATGACAGGTTCTGAGGCAATGTTTGCAGATTTGGGTCATTTCTCTCAGTTATCTATAAAGATTGCTTTTACTTTTGTGGTTTATCCATCATTGATCCTAGCTTATATGGGACAAGCTGCATATCTTTCTCAGCACCATTTTATCGAAAATTATTATCGAATTGGATTCTATGTTTCTGTTCCTGTAAAATTAAGATGGCCTGTTCTGGCTATAGCTATACTTGCTTCTGTGGTAGGCAGTCAAGCAGTTATCACCGGGACCTTTTCAATAATTAAACAATGTTCAGCATTGGGATGCTTTCCTAGAGTCAAGATAATACACACTTCACCCAAATTCTACGGCCAAGTATATATACCGGATATCAACTGGATTTTGATGGTATTATGTTTGGCTGTTACTGTAGGTTTCCGAGATACAAAGCACATGGGAAATGCATCAGGGCTGGCAATTATAACTGTTATGCTGGTCACCACTTGCCTTATGTCCCTTGTAATTGTTCTCTGCTGGCGTTGGAGCATTGCCTTTGCTCTATGCTTTATATTCTTCTTTGGCTCGATCGAGGCTCTTTACTTCTCCGCTTCACTCATTAAATTTCTAGAGGGAGCTTGGGTTCCCATCATCCTCTCCTTTGTCTTTATGATCATCATGTATGTGTGGCACTATGGCACTCTCAAGAAGTACGTGTTTGACGTCCAGAACAAGGTGTCGATTAATTGGCTCCTAAGCCTCGGTCCCACGCTTGGCATTGTACGTGTTCGAGGCATCGGCCTTATTCACACTGAGCTTGTTTCGGGAATCCCGGCTATATTCTCCCACTTTGTCACCAACCTCCCTGCATTCCACCAAGTTGTTGTCTTCCTCTGCGTAAAGTCAGTGCCGGTACCCCATGTTCAATCAGATGAGAGGTTCTTGGTTGGGCGGATCGGTCCAAAGGAGTTCCGCTTCTACCGTTGCATTGCCCGTTATGGCTATCATGACATCCACAAAGATGACATTGAGTTTGAGAAAGACCTCATGTGCAGTATTGCAACCTTCATCCAATCTGCTTGCTCTCTGAATGAGATCAACGATCTCTTGTCGGAGGAATCTTGCAAAGAGGATGAGAGGATGGCGGTGATCGGTGCAGGACACTGGCTTCAGGAGGCGTTGGAGAGCGGCGACTGCCATTGCGAGCATGAGGACAAGCATGAGCACGAGCACAAGAACGAGAACGATAACTCAGACGACTTTCCTGGTCCTTCAAAGAAGCCTCGGGAAATACAGTCACCAATTGTTGTGAAGAAAAAGGTGAAGTTTATGCTGCCTGTGAGCTCAGGACTGGAGTCGACAGTGCAAGAGGAGCTGCAAGACCTGATGGAGGCAAGGGAATCAGGCATGGCCTTCATAATGGGAAACTCTAATATGAAGGCAAAGAGAGGTTCAAGTTTCATGAAGAAACTTGCTCTTAATATCTATGACTTCTTGAGAAGGAATTCTAGGGGGCCCTCCTATGCTGTAAGTATACCACATGCTTCCACACTTGAGGTTGGAATGAACTATCTTGTTTGAGCAAACATAGCTTTTTTCTTTGTTCTTCTTTTTATTTTTTATTTTTTTTATTTTGTTTTTATATGTATAAATAGGTGGAATTTTTGTGCCCATGATGAAACTTTTGCTGCAGCATTTGACATGAATATAATTAGTTTTAACTGTGTGAGATTAGAATTAATGGAAGTGCTTTTTTCC

Network for GWHGAAEX002839

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02705.15	K_trans	26	621	6.30E-191

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0071805	Biological Process	potassium ion transmembrane transport
GO:0015079	Molecular Function	potassium ion transmembrane transporter activity
GO:0016020	Cellular Component	membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	45.820
SRP064423	SRR2545915	Juvenile tuber	67.440
SRP108465	SRR5643513	five period of Gastrodia elata	35.990
	SRR5643514	five period of Gastrodia elata	32.740
	SRR5643515	five period of Gastrodia elata	47.800
	SRR5643524	five period of Gastrodia elata	35.160
	SRR5643525	five period of Gastrodia elata	89.950
	SRR5643528	five period of Gastrodia elata	88.160
	SRR5643658	five period of Gastrodia elata	94.380
	SRR5643659	five period of Gastrodia elata	82.440
	SRR5643660	five period of Gastrodia elata	81.270
	SRR5643661	five period of Gastrodia elata	88.750
	SRR5643662	five period of Gastrodia elata	75.970
	SRR5643663	five period of Gastrodia elata	105.580
	SRR5643664	five period of Gastrodia elata	77.590
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	28.970
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	29.170
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	28.200
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	29.310
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	29.160
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	28.010
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	29.180
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	25.810
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	25.540
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	27.620
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	23.270
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	23.270
SRP279888	Gastro	Gastrodia elata tuber	61.87
	Juven	Juvenile tuber	65.32
	Mother_Gastro	Mother tuber of Gastrodia elata	70.14
	Mother_Juven	Mother tuber of Juvenile	48.62