Detail information of GWHGAAEX002841/evm.TU.scaffold_126.8


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG26672.00E-168COPII vesicle protein
nrgi|672168653|ref|XP_008804334.1|0PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X1 [Phoenix dactylifera]
Swissprottr|Q9T042|PDI54_ARATH2.00E-19Protein disulfide-isomerase 5-4 (Precursor)
trEMBLtr|M0U8H6|M0U8H6_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP12170_001}
TAIRAT1G360502.00E-168Endoplasmic reticulum vesicle transporter protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000119857588891011+
Transcript Sequence

Network for GWHGAAEX002841

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13850.5ERGIC_N7961.20E-29
PF07970.11COPIIcoated_ERV1483636.50E-79
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms36.390
SRR2545915Juvenile tuber27.870
SRP108465SRR5643513five period of Gastrodia elata16.320
SRR5643514five period of Gastrodia elata18.670
SRR5643515five period of Gastrodia elata17.080
SRR5643524five period of Gastrodia elata19.140
SRR5643525five period of Gastrodia elata26.240
SRR5643528five period of Gastrodia elata29.080
SRR5643658five period of Gastrodia elata32.290
SRR5643659five period of Gastrodia elata14.780
SRR5643660five period of Gastrodia elata16.210
SRR5643661five period of Gastrodia elata14.790
SRR5643662five period of Gastrodia elata16.150
SRR5643663five period of Gastrodia elata18.710
SRR5643664five period of Gastrodia elata19.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.690
SRR6049655Rhizomagastrodiae_C368-T10_good_121.990
SRR6049656Rhizomagastrodiae_C368-T07_good_115.890
SRR6049657Rhizomagastrodiae_C368-T07_good_114.830
SRR6049658Rhizomagastrodiae_C368-T04_good_114.470
SRR6049659Rhizomagastrodiae_C368-T04_good_114.620
SRR6049660Rhizomagastrodiae_C368-T01_good_115.850
SRR6049661Rhizomagastrodiae_C368-T04_good_117.150
SRR6049662Rhizomagastrodiae_C368-T01_good_119.820
SRR6049663Rhizomagastrodiae_C368-T01_good_115.380
SRR6049664Rhizomagastrodiae_C368-T10_good_120.190
SRR6049665Rhizomagastrodiae_C368-T10_good_120.190
SRP279888GastroGastrodia elata tuber 16.32
JuvenJuvenile tuber12.15
Mother_GastroMother tuber of Gastrodia elata 13.33
Mother_JuvenMother tuber of Juvenile 10.16