Detail information of GWHGAAEX002854/evm.TU.scaffold_127.12


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|720058533|ref|XP_010274311.1|2.18E-16PREDICTED: uncharacterized protein At1g10890-like [Nelumbo nucifera]
Swissprottr|P0CB26|Y1089_ARATH8.00E-06Uncharacterized protein At1g10890
trEMBLtr|M0RJM7|M0RJM7_MUSAM5.00E-16Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P19520_001}
TAIRAT1G10890_12.00E-06Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000141407130431340+
Transcript Sequence

Network for GWHGAAEX002854

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.930
SRR2545915Juvenile tuber8.890
SRP108465SRR5643513five period of Gastrodia elata4.310
SRR5643514five period of Gastrodia elata3.160
SRR5643515five period of Gastrodia elata4.400
SRR5643524five period of Gastrodia elata2.790
SRR5643525five period of Gastrodia elata4.400
SRR5643528five period of Gastrodia elata4.980
SRR5643658five period of Gastrodia elata4.540
SRR5643659five period of Gastrodia elata2.590
SRR5643660five period of Gastrodia elata3.470
SRR5643661five period of Gastrodia elata3.620
SRR5643662five period of Gastrodia elata3.580
SRR5643663five period of Gastrodia elata4.050
SRR5643664five period of Gastrodia elata4.240
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_14.250
SRR6049655Rhizomagastrodiae_C368-T10_good_14.780
SRR6049656Rhizomagastrodiae_C368-T07_good_11.840
SRR6049657Rhizomagastrodiae_C368-T07_good_13.570
SRR6049658Rhizomagastrodiae_C368-T04_good_12.850
SRR6049659Rhizomagastrodiae_C368-T04_good_13.050
SRR6049660Rhizomagastrodiae_C368-T01_good_13.120
SRR6049661Rhizomagastrodiae_C368-T04_good_12.390
SRR6049662Rhizomagastrodiae_C368-T01_good_13.020
SRR6049663Rhizomagastrodiae_C368-T01_good_13.110
SRR6049664Rhizomagastrodiae_C368-T10_good_12.970
SRR6049665Rhizomagastrodiae_C368-T10_good_12.970
SRP279888GastroGastrodia elata tuber 2.92
JuvenJuvenile tuber3.47
Mother_GastroMother tuber of Gastrodia elata 8.59
Mother_JuvenMother tuber of Juvenile 10.23