Detail information of GWHGAAEX002865/evm.TU.scaffold_127.22


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743801914|ref|XP_010926472.1|4.06E-71PREDICTED: DELLA protein SLR1-like [Elaeis guineensis]
Swissprottr|Q945J4|DWRF8_MAIZE4.00E-70DELLA protein DWARF8
trEMBLtr|M0RJP0|M0RJP0_MUSAM1.00E-70Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P19650_001}
TAIRAT3G034502.00E-58RGA-like 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000141853239854057+
Transcript Sequence

Network for GWHGAAEX002865

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03514.13GRAS11419.10E-44
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGRAS

KEGG pathway

KO Enzyme pathway mapID
K14494DELLA Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.020
SRR2545915Juvenile tuber4.680
SRP108465SRR5643513five period of Gastrodia elata12.910
SRR5643514five period of Gastrodia elata12.700
SRR5643515five period of Gastrodia elata7.870
SRR5643524five period of Gastrodia elata8.600
SRR5643525five period of Gastrodia elata5.320
SRR5643528five period of Gastrodia elata2.500
SRR5643658five period of Gastrodia elata3.670
SRR5643659five period of Gastrodia elata17.670
SRR5643660five period of Gastrodia elata25.600
SRR5643661five period of Gastrodia elata20.790
SRR5643662five period of Gastrodia elata14.820
SRR5643663five period of Gastrodia elata11.350
SRR5643664five period of Gastrodia elata9.030
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.720
SRR6049655Rhizomagastrodiae_C368-T10_good_112.330
SRR6049656Rhizomagastrodiae_C368-T07_good_121.060
SRR6049657Rhizomagastrodiae_C368-T07_good_125.730
SRR6049658Rhizomagastrodiae_C368-T04_good_133.940
SRR6049659Rhizomagastrodiae_C368-T04_good_132.930
SRR6049660Rhizomagastrodiae_C368-T01_good_117.770
SRR6049661Rhizomagastrodiae_C368-T04_good_122.950
SRR6049662Rhizomagastrodiae_C368-T01_good_119.310
SRR6049663Rhizomagastrodiae_C368-T01_good_116.630
SRR6049664Rhizomagastrodiae_C368-T10_good_121.250
SRR6049665Rhizomagastrodiae_C368-T10_good_121.250
SRP279888GastroGastrodia elata tuber 7.76
JuvenJuvenile tuber9.35
Mother_GastroMother tuber of Gastrodia elata 3.13
Mother_JuvenMother tuber of Juvenile 4.60