Detail information of GWHGAAEX002873/evm.TU.scaffold_127.35


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672166592|ref|XP_008803228.1|1.96E-07PREDICTED: ruBisCO large subunit-binding protein subunit beta, chloroplastic-like [Phoenix dactylifera]
Swissprottr|Q43831|RUBB_SECCE3.00E-08RuBisCO large subunit-binding protein subunit beta, chloroplastic (Fragment)
trEMBLtr|A8QXH7|A8QXH7_ORYSJ2.00E-07Putative chaperonin 60 beta {ECO:0000313|EMBL:BAF92703.1} (Fragment)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000014112145261219178-
Transcript Sequence

Network for GWHGAAEX002873

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K04077groEL, HSPD1 RNA degradation map03018
Longevity regulating pathway - wormmap04212

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.260
SRR2545915Juvenile tuber0.730
SRP108465SRR5643513five period of Gastrodia elata0.140
SRR5643514five period of Gastrodia elata0.430
SRR5643515five period of Gastrodia elata0.530
SRR5643524five period of Gastrodia elata0.460
SRR5643525five period of Gastrodia elata1.160
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.320
SRR5643659five period of Gastrodia elata0.570
SRR5643660five period of Gastrodia elata0.380
SRR5643661five period of Gastrodia elata0.380
SRR5643662five period of Gastrodia elata0.380
SRR5643663five period of Gastrodia elata0.480
SRR5643664five period of Gastrodia elata0.230
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.000
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_10.110
SRR6049657Rhizomagastrodiae_C368-T07_good_10.200
SRR6049658Rhizomagastrodiae_C368-T04_good_11.260
SRR6049659Rhizomagastrodiae_C368-T04_good_10.600
SRR6049660Rhizomagastrodiae_C368-T01_good_10.000
SRR6049661Rhizomagastrodiae_C368-T04_good_10.410
SRR6049662Rhizomagastrodiae_C368-T01_good_10.310
SRR6049663Rhizomagastrodiae_C368-T01_good_10.300
SRR6049664Rhizomagastrodiae_C368-T10_good_10.350
SRR6049665Rhizomagastrodiae_C368-T10_good_10.350
SRP279888GastroGastrodia elata tuber 1.12
JuvenJuvenile tuber1.09
Mother_GastroMother tuber of Gastrodia elata 2.89
Mother_JuvenMother tuber of Juvenile 1.43