Detail information of GWHGAAEX002888/evm.TU.scaffold_127.51


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG06566.00E-76G1/S-specific cyclin D
nrgi|743849893|ref|XP_010939736.1|9.17E-132PREDICTED: cyclin-D3-1-like [Elaeis guineensis]
Swissprottr|Q8LHA8|CCD22_ORYSJ2.00E-92Cyclin-D2-2
trEMBLtr|M0TSZ6|M0TSZ6_MUSAM9.00E-122Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P23430_001}
TAIRAT2G224906.00E-76Cyclin D2;1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000014116913571693902+
Transcript Sequence

Network for GWHGAAEX002888

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00134.22Cyclin_N671941.20E-26
PF02984.18Cyclin_C1972909.50E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005634Cellular Componentnucleus

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.220
SRR2545915Juvenile tuber2.990
SRP108465SRR5643513five period of Gastrodia elata7.310
SRR5643514five period of Gastrodia elata5.130
SRR5643515five period of Gastrodia elata2.470
SRR5643524five period of Gastrodia elata4.350
SRR5643525five period of Gastrodia elata1.230
SRR5643528five period of Gastrodia elata0.790
SRR5643658five period of Gastrodia elata0.370
SRR5643659five period of Gastrodia elata2.410
SRR5643660five period of Gastrodia elata1.700
SRR5643661five period of Gastrodia elata1.960
SRR5643662five period of Gastrodia elata1.530
SRR5643663five period of Gastrodia elata1.300
SRR5643664five period of Gastrodia elata0.690
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.850
SRR6049655Rhizomagastrodiae_C368-T10_good_12.760
SRR6049656Rhizomagastrodiae_C368-T07_good_12.570
SRR6049657Rhizomagastrodiae_C368-T07_good_11.940
SRR6049658Rhizomagastrodiae_C368-T04_good_11.760
SRR6049659Rhizomagastrodiae_C368-T04_good_11.400
SRR6049660Rhizomagastrodiae_C368-T01_good_13.850
SRR6049661Rhizomagastrodiae_C368-T04_good_12.810
SRR6049662Rhizomagastrodiae_C368-T01_good_14.930
SRR6049663Rhizomagastrodiae_C368-T01_good_14.050
SRR6049664Rhizomagastrodiae_C368-T10_good_13.440
SRR6049665Rhizomagastrodiae_C368-T10_good_13.440
SRP279888GastroGastrodia elata tuber 2.33
JuvenJuvenile tuber2.36
Mother_GastroMother tuber of Gastrodia elata 1.01
Mother_JuvenMother tuber of Juvenile 1.09