Detail information of GWHGAAEX002891/evm.TU.scaffold_127.56


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743772739|ref|XP_010916682.1|1.09E-49PREDICTED: transcription factor SAC51-like [Elaeis guineensis]
Swissprottr|Q9FGB0|BH145_ARATH8.00E-13Transcription factor bHLH145
trEMBLtr|M0RRS0|M0RRS0_MUSAM1.00E-47Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P12900_001}
TAIRAT5G500103.00E-12sequence-specific DNA binding transcription factors;transcription regulators

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000014117963751799091+
Transcript Sequence

Network for GWHGAAEX002891

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0046983Molecular Functionprotein dimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms187.130
SRR2545915Juvenile tuber202.150
SRP108465SRR5643513five period of Gastrodia elata198.790
SRR5643514five period of Gastrodia elata168.940
SRR5643515five period of Gastrodia elata299.600
SRR5643524five period of Gastrodia elata169.990
SRR5643525five period of Gastrodia elata288.870
SRR5643528five period of Gastrodia elata257.000
SRR5643658five period of Gastrodia elata307.020
SRR5643659five period of Gastrodia elata209.550
SRR5643660five period of Gastrodia elata202.910
SRR5643661five period of Gastrodia elata204.500
SRR5643662five period of Gastrodia elata228.160
SRR5643663five period of Gastrodia elata256.110
SRR5643664five period of Gastrodia elata212.930
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1196.490
SRR6049655Rhizomagastrodiae_C368-T10_good_1136.160
SRR6049656Rhizomagastrodiae_C368-T07_good_1178.480
SRR6049657Rhizomagastrodiae_C368-T07_good_1194.610
SRR6049658Rhizomagastrodiae_C368-T04_good_1194.480
SRR6049659Rhizomagastrodiae_C368-T04_good_1195.300
SRR6049660Rhizomagastrodiae_C368-T01_good_1220.870
SRR6049661Rhizomagastrodiae_C368-T04_good_1202.720
SRR6049662Rhizomagastrodiae_C368-T01_good_1142.960
SRR6049663Rhizomagastrodiae_C368-T01_good_1235.310
SRR6049664Rhizomagastrodiae_C368-T10_good_1152.910
SRR6049665Rhizomagastrodiae_C368-T10_good_1152.910
SRP279888GastroGastrodia elata tuber 292.20
JuvenJuvenile tuber132.96
Mother_GastroMother tuber of Gastrodia elata 297.34
Mother_JuvenMother tuber of Juvenile 216.17