Detail information of GWHGAAEX002897/evm.TU.scaffold_127.67


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG12674.00E-37Mitochondrial transcription termination factor, mTERF
nrgi|743772767|ref|XP_010916695.1|1.98E-61PREDICTED: bet1-like protein At4g14600 [Elaeis guineensis]
Swissprottr|Q8VXX9|BETL1_ARATH2.00E-49Bet1-like protein At4g14600
trEMBLtr|M0RLE0|M0RLE0_MUSAM4.00E-61Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P25660_001}
TAIRAT1G290604.00E-37Target SNARE coiled-coil domain protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000014123130752325682+
Transcript Sequence

Network for GWHGAAEX002897

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K08505SFT1 SNARE interactions in vesicular transport map04130

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms70.230
SRR2545915Juvenile tuber64.000
SRP108465SRR5643513five period of Gastrodia elata46.140
SRR5643514five period of Gastrodia elata42.050
SRR5643515five period of Gastrodia elata45.500
SRR5643524five period of Gastrodia elata45.630
SRR5643525five period of Gastrodia elata59.920
SRR5643528five period of Gastrodia elata57.770
SRR5643658five period of Gastrodia elata80.850
SRR5643659five period of Gastrodia elata43.540
SRR5643660five period of Gastrodia elata49.270
SRR5643661five period of Gastrodia elata44.220
SRR5643662five period of Gastrodia elata50.310
SRR5643663five period of Gastrodia elata46.110
SRR5643664five period of Gastrodia elata51.960
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_140.980
SRR6049655Rhizomagastrodiae_C368-T10_good_136.810
SRR6049656Rhizomagastrodiae_C368-T07_good_144.170
SRR6049657Rhizomagastrodiae_C368-T07_good_141.640
SRR6049658Rhizomagastrodiae_C368-T04_good_145.340
SRR6049659Rhizomagastrodiae_C368-T04_good_147.990
SRR6049660Rhizomagastrodiae_C368-T01_good_142.160
SRR6049661Rhizomagastrodiae_C368-T04_good_142.940
SRR6049662Rhizomagastrodiae_C368-T01_good_143.230
SRR6049663Rhizomagastrodiae_C368-T01_good_143.480
SRR6049664Rhizomagastrodiae_C368-T10_good_149.780
SRR6049665Rhizomagastrodiae_C368-T10_good_149.780
SRP279888GastroGastrodia elata tuber 55.56
JuvenJuvenile tuber54.03
Mother_GastroMother tuber of Gastrodia elata 79.31
Mother_JuvenMother tuber of Juvenile 67.73