Detail information of GWHGAAEX002899/evm.TU.scaffold_127.69


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG22960Integral membrane protein
nrgi|672134546|ref|XP_008790925.1|0PREDICTED: LMBR1 domain-containing protein 2 homolog A [Phoenix dactylifera]
trEMBLtr|M0SVX3|M0SVX3_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P05440_001}
TAIRAT5G652900LMBR1-like membrane protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000014123329732361282-
Transcript Sequence

Network for GWHGAAEX002899

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04791.15LMBR124001.70E-62
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms32.600
SRR2545915Juvenile tuber34.370
SRP108465SRR5643513five period of Gastrodia elata20.430
SRR5643514five period of Gastrodia elata18.180
SRR5643515five period of Gastrodia elata18.560
SRR5643524five period of Gastrodia elata18.560
SRR5643525five period of Gastrodia elata32.880
SRR5643528five period of Gastrodia elata24.900
SRR5643658five period of Gastrodia elata35.690
SRR5643659five period of Gastrodia elata21.380
SRR5643660five period of Gastrodia elata24.420
SRR5643661five period of Gastrodia elata24.530
SRR5643662five period of Gastrodia elata32.110
SRR5643663five period of Gastrodia elata32.350
SRR5643664five period of Gastrodia elata37.150
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.060
SRR6049655Rhizomagastrodiae_C368-T10_good_121.910
SRR6049656Rhizomagastrodiae_C368-T07_good_121.080
SRR6049657Rhizomagastrodiae_C368-T07_good_127.710
SRR6049658Rhizomagastrodiae_C368-T04_good_130.470
SRR6049659Rhizomagastrodiae_C368-T04_good_134.980
SRR6049660Rhizomagastrodiae_C368-T01_good_126.140
SRR6049661Rhizomagastrodiae_C368-T04_good_127.470
SRR6049662Rhizomagastrodiae_C368-T01_good_117.360
SRR6049663Rhizomagastrodiae_C368-T01_good_118.800
SRR6049664Rhizomagastrodiae_C368-T10_good_117.380
SRR6049665Rhizomagastrodiae_C368-T10_good_117.380
SRP279888GastroGastrodia elata tuber 42.93
JuvenJuvenile tuber38.54
Mother_GastroMother tuber of Gastrodia elata 33.04
Mother_JuvenMother tuber of Juvenile 38.31