Detail information of GWHGAAEX002922/evm.TU.scaffold_128.14
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG1183 | 8.00E-134 | N-acetylglucosaminyltransferase complex, subunit PIG-Q/GPI1, required for phosphatidylinositol biosynthesis |
| nr | gi|672169720|ref|XP_008804899.1| | 0 | PREDICTED: uncharacterized protein LOC103718037 isoform X2 [Phoenix dactylifera] |
| trEMBL | tr|M0SXX3|M0SXX3_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P12440_001} |
| TAIR | AT3G57170 | 8.00E-134 | N-acetylglucosaminyl transferase component family protein / Gpi1 family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000130 | 755947 | 779194 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX002922
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF05024.14 | Gpi1 | 374 | 562 | 8.30E-53 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K03860 | PIGQ, GPI1 | Metabolic pathways | map01100 |
| Glycosylphosphatidylinositol (GPI)-anchor biosynthesis | map00563 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006506 | Biological Process | GPI anchor biosynthetic process |
| GO:0017176 | Molecular Function | phosphatidylinositol N-acetylglucosaminyltransferase activity |
| GO:0016021 | Cellular Component | integral component of membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 50.860 |
| SRR2545915 | Juvenile tuber | 41.880 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 21.900 |
| SRR5643514 | five period of Gastrodia elata | 18.710 | |
| SRR5643515 | five period of Gastrodia elata | 18.860 | |
| SRR5643524 | five period of Gastrodia elata | 18.330 | |
| SRR5643525 | five period of Gastrodia elata | 22.430 | |
| SRR5643528 | five period of Gastrodia elata | 18.370 | |
| SRR5643658 | five period of Gastrodia elata | 26.780 | |
| SRR5643659 | five period of Gastrodia elata | 19.170 | |
| SRR5643660 | five period of Gastrodia elata | 19.910 | |
| SRR5643661 | five period of Gastrodia elata | 17.980 | |
| SRR5643662 | five period of Gastrodia elata | 21.440 | |
| SRR5643663 | five period of Gastrodia elata | 25.060 | |
| SRR5643664 | five period of Gastrodia elata | 22.580 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 30.930 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 23.550 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 26.070 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 31.660 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 31.500 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 33.560 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 28.210 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 25.180 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 20.320 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 24.790 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 19.410 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 19.410 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 33.88 |
| Juven | Juvenile tuber | 31.38 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 19.88 | |
| Mother_Juven | Mother tuber of Juvenile | 26.92 |