Gene detail

Detail information of GWHGAAEX002935/evm.TU.scaffold_128.35

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|695080678\|ref\|XP_009387816.1\|	0	PREDICTED: uncharacterized protein At1g04910 [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q8W486\|Y1491_ARATH	9.00E-81	Uncharacterized protein At1g04910
trEMBL	tr\|M0UB14\|M0UB14_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_AchrUn_randomP21060_001}
TAIR	AT3G26370	0	O-fucosyltransferase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000130	1377607	1412752	-

Transcript Sequence
>GWHTAAEX002935 CTCGGCCAAACCCTGGTGAAGTGGTTTTAGCATTGAGCTTTAAACCATATGCATTGGCGATTTTTTCTTGAGTATCAGCGAGTGGCACCAATCTAGGCCACCGCCCTCCGATGAGCGCCAGGGCGGTTTCTTCTCCTGTCAAGCGCGATGACGCTGGCTCTCCTTTTTTCGCCGGTGACATGGCTGTAGGAAGCGATGACGACAGCCATCGTCATTTCCCTCGCGCCCGAGATCGGAATCGAGTTCGGGATCATGCTCACGACAAAAAACCTCACCGCTTCTTTCTCCTCCGTTTCCTCCCTTCACTCCGCACTTTCATTTCGTTTAACGACCCTAGGACTTTCTCCCTTCTTTCCATTCACCGATTTTATCTCGCCTCCCTTGCTTTTCTCGTCTTCATCGGGCTTGTGTCTCTTCCTAACCTATGGAGCCGCCTGAACGCGCCTTATCTGTGCATTAAAGAAGGAATAACTCTTCGCTGCCCTGCTGAGAGTGTGCCTCCATCACTCTGGGAGAATCCACATTCTTCTACGACAGCATGGAAGCCATGTGCTGAGCGAAGCGAGGAGCCTATTTCAGATGTTCTCGGAAATGAAAGCAATGGCTATATATTCATACATGCAGAGGGTGGTTTGAATCAGCAACGTATAGCTATATGTAATGCTGTTGCAGTGGCGAAGATAATGAATGCAACTCTTATTCTACCTGTACTGAAACAAGATCAGATATGGAAGGATCAAACGAAATTTGAAGACATATTTGATGTAGACCATTTCATTGACTACCTTAAGAATGATGTGCGTATTGTGAGTGATATTCCGGACTGGTTTACAGACAAAGCAGAGCTGTTTACAAGTATAAGGCGGACAGTGAAAAACATCCCAAAATATGCTCCAGCGCAGTTTTATATAGACAATGTACTTCCACGTATCAAGGAGAAGAAAATTATGGCTCTCAAGCCATTTGTGGATAGGCTGGGGTATGATAATGTCCCTTCTGAAATAAACCGGCTTAGGTGCCGGGTCAATTATCATGCATTGAAATTTTTGCCTGAGATTGAAGAAATGGCTGATCTTCTGGTATCAAGGATGAGAAATCGGACTGGAAGCTCAAACCCATACATGGCACTTCATCTACGATTTGAAAAGGGAATGGTTGGTCTGTCATTTTGTGATTTTGTTGGAACAAGAGAGGAGAAGGCCATGATGGCTGCATATAGGCAGAAGGAATGGCCAAGGCGTTACAAGAATGGGTCTCATCTTTGGCAGCTTGCTTTGCAGAAGAGAAAGGAAGGACGTTGTCCTCTTGAGCCTGGTGAGGTAGCTGTTATTCTACGAGCTATGGGTTACCCTAAAGAAACTCAGATTTATGTTGCATCGGGACAAGTATATGGTGGGAAAAATCGGATGGCTCCTCTGAGGAATATGTTTCCCAATTTGGTGACAAAGGAGGAATTGGCTGGCACAGACGAACTGAGTGGGTTCAGGAAGCATGTAACAAGCTTGGCTGCCTTGGATTTTCTGGTATGCCTCAAGTCAGACGTGTTTGTGATGACCCACGGAGGTAACTTTGCTAAGCTGATAATAGGGGCTCGGAGGTATATGGGCCACCGCCTCAAGTCCATAAAGCCGGACAAAGGCCTCATGTCCAAGTCCTTTGGCGACCCATTCATGGGATGGGCCTCCTTTGTCGAGGACGTCGCAATCACCCACCACACACGCACTGGCCTTCCCGAAGAGACTTTCCCCAACTATGATCTATGGGAGAATCCCTTGACTCATTGTATGTGTAGGGGGGCTTGATGCCCTTTGTTTCCAGTTGCTGCTTTTTCTTCTTATTTGTTTTCTTTTTTAAGGACACCCTTCTCTAAATAGAAAACACCACTGATTATTTAGTAGTCAAATTGAGTTTTTTTGTATAGCTTCTTGTGTGTATCTAATGGTGCCAAGCTTAGTGCAAAAATATATATTTAGTGCAAACATTATCAAGCTTGGTGCATATAACTCATGCGTGTGCTGAATTGCAAGTCGTGTGTAGTCTCAGTTCATGTAAAATTAAGCAAAGCAATGTTCAAAAATTAGAATGATTAAAATTTAAACTATATTAGGCTATAGCGAAAGGAAGTTTAATTGGGGCTGAGACATCAACTTGCT

Network for GWHGAAEX002935

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF10250.8	O-FucT	166	498	3.50E-75

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT106

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	16.190
SRP064423	SRR2545915	Juvenile tuber	21.430
SRP108465	SRR5643513	five period of Gastrodia elata	19.330
	SRR5643514	five period of Gastrodia elata	19.290
	SRR5643515	five period of Gastrodia elata	18.260
	SRR5643524	five period of Gastrodia elata	18.380
	SRR5643525	five period of Gastrodia elata	12.490
	SRR5643528	five period of Gastrodia elata	10.390
	SRR5643658	five period of Gastrodia elata	16.460
	SRR5643659	five period of Gastrodia elata	15.330
	SRR5643660	five period of Gastrodia elata	15.860
	SRR5643661	five period of Gastrodia elata	16.690
	SRR5643662	five period of Gastrodia elata	15.790
	SRR5643663	five period of Gastrodia elata	17.810
	SRR5643664	five period of Gastrodia elata	16.700
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	19.690
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	24.660
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	19.340
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	22.820
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	19.450
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	22.390
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	24.180
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	21.520
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	16.750
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	18.580
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	17.590
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	17.590
SRP279888	Gastro	Gastrodia elata tuber	19.21
	Juven	Juvenile tuber	39.99
	Mother_Gastro	Mother tuber of Gastrodia elata	13.76
	Mother_Juven	Mother tuber of Juvenile	21.07