Detail information of GWHGAAEX002937/evm.TU.scaffold_128.38


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|116623982|ref|YP_826138.1|7.00E-08hypothetical protein Acid_4894 [Candidatus Solibacter usitatus Ellin6076]
KOGKOG15722.00E-91Predicted protein tyrosine phosphatase
nrgi|743766316|ref|XP_010913396.1|2.02E-94PREDICTED: probable tyrosine-protein phosphatase At1g05000 [Elaeis guineensis]
Swissprottr|Q9ZVN4|Y1500_ARATH6.00E-92Probable tyrosine-protein phosphatase At1g05000
trEMBLtr|V4U9S2|V4U9S2_9ROSI2.00E-94Uncharacterized protein {ECO:0000313|EMBL:ESR60895.1}
TAIRAT1G050002.00E-91Phosphotyrosine protein phosphatases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013015182131524854-
Transcript Sequence

Network for GWHGAAEX002937

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03162.12Y_phosphatase2221741.10E-63
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016311Biological Processdephosphorylation
GO:0004725Molecular Functionprotein tyrosine phosphatase activity
GO:0016791Molecular Functionphosphatase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.830
SRR2545915Juvenile tuber31.410
SRP108465SRR5643513five period of Gastrodia elata39.340
SRR5643514five period of Gastrodia elata43.990
SRR5643515five period of Gastrodia elata32.640
SRR5643524five period of Gastrodia elata41.420
SRR5643525five period of Gastrodia elata110.870
SRR5643528five period of Gastrodia elata90.770
SRR5643658five period of Gastrodia elata119.460
SRR5643659five period of Gastrodia elata29.140
SRR5643660five period of Gastrodia elata31.430
SRR5643661five period of Gastrodia elata28.920
SRR5643662five period of Gastrodia elata30.570
SRR5643663five period of Gastrodia elata27.520
SRR5643664five period of Gastrodia elata30.560
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_131.610
SRR6049655Rhizomagastrodiae_C368-T10_good_127.700
SRR6049656Rhizomagastrodiae_C368-T07_good_138.150
SRR6049657Rhizomagastrodiae_C368-T07_good_129.940
SRR6049658Rhizomagastrodiae_C368-T04_good_138.740
SRR6049659Rhizomagastrodiae_C368-T04_good_142.720
SRR6049660Rhizomagastrodiae_C368-T01_good_131.890
SRR6049661Rhizomagastrodiae_C368-T04_good_133.690
SRR6049662Rhizomagastrodiae_C368-T01_good_135.500
SRR6049663Rhizomagastrodiae_C368-T01_good_138.570
SRR6049664Rhizomagastrodiae_C368-T10_good_138.910
SRR6049665Rhizomagastrodiae_C368-T10_good_138.910
SRP279888GastroGastrodia elata tuber 28.72
JuvenJuvenile tuber30.57
Mother_GastroMother tuber of Gastrodia elata 60.77
Mother_JuvenMother tuber of Juvenile 28.74