Detail information of GWHGAAEX002940/evm.TU.scaffold_128.42


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743809342|ref|XP_010928582.1|1.25E-139PREDICTED: uncharacterized protein LOC105050314 [Elaeis guineensis]
Swissprottr|P0C7P8|LHWL1_ARATH9.00E-15Transcription factor EMB1444
trEMBLtr|A0A061E6Z5|A0A061E6Z5_THECC2.00E-136Serine/threonine-protein kinase WNK-related {ECO:0000313|EMBL:EOY00418.1}
TAIRAT1G600609.00E-119Serine/threonine-protein kinase WNK (With No Lysine)-related

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013018042271857640+
Transcript Sequence

Network for GWHGAAEX002940

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14215.5bHLH-MYC_N152286.40E-31
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.710
SRR2545915Juvenile tuber18.740
SRP108465SRR5643513five period of Gastrodia elata7.900
SRR5643514five period of Gastrodia elata8.690
SRR5643515five period of Gastrodia elata9.150
SRR5643524five period of Gastrodia elata10.860
SRR5643525five period of Gastrodia elata36.650
SRR5643528five period of Gastrodia elata38.640
SRR5643658five period of Gastrodia elata44.960
SRR5643659five period of Gastrodia elata9.480
SRR5643660five period of Gastrodia elata9.620
SRR5643661five period of Gastrodia elata8.860
SRR5643662five period of Gastrodia elata16.690
SRR5643663five period of Gastrodia elata23.270
SRR5643664five period of Gastrodia elata14.090
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.130
SRR6049655Rhizomagastrodiae_C368-T10_good_18.480
SRR6049656Rhizomagastrodiae_C368-T07_good_16.200
SRR6049657Rhizomagastrodiae_C368-T07_good_16.720
SRR6049658Rhizomagastrodiae_C368-T04_good_15.570
SRR6049659Rhizomagastrodiae_C368-T04_good_15.340
SRR6049660Rhizomagastrodiae_C368-T01_good_15.610
SRR6049661Rhizomagastrodiae_C368-T04_good_19.600
SRR6049662Rhizomagastrodiae_C368-T01_good_17.370
SRR6049663Rhizomagastrodiae_C368-T01_good_13.820
SRR6049664Rhizomagastrodiae_C368-T10_good_18.870
SRR6049665Rhizomagastrodiae_C368-T10_good_18.870
SRP279888GastroGastrodia elata tuber 15.72
JuvenJuvenile tuber4.39
Mother_GastroMother tuber of Gastrodia elata 20.33
Mother_JuvenMother tuber of Juvenile 2.64