Detail information of GWHGAAEX002944/evm.TU.scaffold_128.46


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|427739976|ref|YP_007059520.1|8.00E-10MIP family channel protein [Rivularia sp. PCC 7116]
KOGKOG02234.00E-68Aquaporin (major intrinsic protein family)
nrgi|695002671|ref|XP_009381374.1|8.38E-104PREDICTED: aquaporin SIP1-2-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9ATM2|SIP12_MAIZE1.00E-86Aquaporin SIP1-2
trEMBLtr|M1TFX6|M1TFX6_CAMSI4.00E-100Aquaporin protein AQU20 {ECO:0000313|EMBL:AGG39698.1}
TAIRAT3G040904.00E-68small and basic intrinsic protein 1A

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013022107472222702+
Transcript Sequence

Network for GWHGAAEX002944

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00230.19MIP412248.20E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0015267Molecular Functionchannel activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms27.740
SRR2545915Juvenile tuber43.610
SRP108465SRR5643513five period of Gastrodia elata38.530
SRR5643514five period of Gastrodia elata66.010
SRR5643515five period of Gastrodia elata50.550
SRR5643524five period of Gastrodia elata63.340
SRR5643525five period of Gastrodia elata67.180
SRR5643528five period of Gastrodia elata78.250
SRR5643658five period of Gastrodia elata77.500
SRR5643659five period of Gastrodia elata63.760
SRR5643660five period of Gastrodia elata58.690
SRR5643661five period of Gastrodia elata64.240
SRR5643662five period of Gastrodia elata56.310
SRR5643663five period of Gastrodia elata61.700
SRR5643664five period of Gastrodia elata48.350
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_143.320
SRR6049655Rhizomagastrodiae_C368-T10_good_158.420
SRR6049656Rhizomagastrodiae_C368-T07_good_150.510
SRR6049657Rhizomagastrodiae_C368-T07_good_138.090
SRR6049658Rhizomagastrodiae_C368-T04_good_135.290
SRR6049659Rhizomagastrodiae_C368-T04_good_130.160
SRR6049660Rhizomagastrodiae_C368-T01_good_134.310
SRR6049661Rhizomagastrodiae_C368-T04_good_139.350
SRR6049662Rhizomagastrodiae_C368-T01_good_159.180
SRR6049663Rhizomagastrodiae_C368-T01_good_151.220
SRR6049664Rhizomagastrodiae_C368-T10_good_160.820
SRR6049665Rhizomagastrodiae_C368-T10_good_160.820
SRP279888GastroGastrodia elata tuber 57.85
JuvenJuvenile tuber49.51
Mother_GastroMother tuber of Gastrodia elata 35.27
Mother_JuvenMother tuber of Juvenile 37.12