Detail information of GWHGAAEX002946/evm.TU.scaffold_128.48


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG26410Predicted seven transmembrane receptor - rhodopsin family
nrgi|743880631|ref|XP_010908692.1|0PREDICTED: transmembrane protein 184A-like isoform X1 [Elaeis guineensis]
trEMBLtr|M0T259|M0T259_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P27340_001}
TAIRAT5G267340Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013023479562374575-
Transcript Sequence

Network for GWHGAAEX002946

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03619.15Solute_trans_a72661.10E-85
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.770
SRR2545915Juvenile tuber8.250
SRP108465SRR5643513five period of Gastrodia elata12.210
SRR5643514five period of Gastrodia elata8.390
SRR5643515five period of Gastrodia elata15.400
SRR5643524five period of Gastrodia elata9.610
SRR5643525five period of Gastrodia elata20.870
SRR5643528five period of Gastrodia elata16.070
SRR5643658five period of Gastrodia elata16.390
SRR5643659five period of Gastrodia elata11.910
SRR5643660five period of Gastrodia elata10.970
SRR5643661five period of Gastrodia elata12.580
SRR5643662five period of Gastrodia elata12.000
SRR5643663five period of Gastrodia elata12.560
SRR5643664five period of Gastrodia elata11.250
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.830
SRR6049655Rhizomagastrodiae_C368-T10_good_116.310
SRR6049656Rhizomagastrodiae_C368-T07_good_110.220
SRR6049657Rhizomagastrodiae_C368-T07_good_111.720
SRR6049658Rhizomagastrodiae_C368-T04_good_114.760
SRR6049659Rhizomagastrodiae_C368-T04_good_115.320
SRR6049660Rhizomagastrodiae_C368-T01_good_113.900
SRR6049661Rhizomagastrodiae_C368-T04_good_113.320
SRR6049662Rhizomagastrodiae_C368-T01_good_112.500
SRR6049663Rhizomagastrodiae_C368-T01_good_113.610
SRR6049664Rhizomagastrodiae_C368-T10_good_113.760
SRR6049665Rhizomagastrodiae_C368-T10_good_113.760
SRP279888GastroGastrodia elata tuber 8.69
JuvenJuvenile tuber8.38
Mother_GastroMother tuber of Gastrodia elata 26.40
Mother_JuvenMother tuber of Juvenile 11.44