Detail information of GWHGAAEX002950/evm.TU.scaffold_128.52


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672157814|ref|XP_008798629.1|6.95E-98PREDICTED: uncharacterized protein LOC103713466 [Phoenix dactylifera]
trEMBLtr|M0TF39|M0TF39_MUSAM2.00E-97Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P05990_001}
TAIRAT3G027002.00E-81NC domain-containing protein-related

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013025708642577691-
Transcript Sequence

Network for GWHGAAEX002950

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04970.12LRAT121646.50E-34
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.780
SRR2545915Juvenile tuber0.870
SRP108465SRR5643513five period of Gastrodia elata0.840
SRR5643514five period of Gastrodia elata1.480
SRR5643515five period of Gastrodia elata1.970
SRR5643524five period of Gastrodia elata1.390
SRR5643525five period of Gastrodia elata2.010
SRR5643528five period of Gastrodia elata2.850
SRR5643658five period of Gastrodia elata2.900
SRR5643659five period of Gastrodia elata1.710
SRR5643660five period of Gastrodia elata3.010
SRR5643661five period of Gastrodia elata1.780
SRR5643662five period of Gastrodia elata1.640
SRR5643663five period of Gastrodia elata2.490
SRR5643664five period of Gastrodia elata1.400
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.920
SRR6049655Rhizomagastrodiae_C368-T10_good_10.760
SRR6049656Rhizomagastrodiae_C368-T07_good_10.330
SRR6049657Rhizomagastrodiae_C368-T07_good_11.590
SRR6049658Rhizomagastrodiae_C368-T04_good_10.760
SRR6049659Rhizomagastrodiae_C368-T04_good_10.590
SRR6049660Rhizomagastrodiae_C368-T01_good_12.210
SRR6049661Rhizomagastrodiae_C368-T04_good_10.810
SRR6049662Rhizomagastrodiae_C368-T01_good_10.610
SRR6049663Rhizomagastrodiae_C368-T01_good_10.900
SRR6049664Rhizomagastrodiae_C368-T10_good_11.660
SRR6049665Rhizomagastrodiae_C368-T10_good_11.660
SRP279888GastroGastrodia elata tuber 2.18
JuvenJuvenile tuber4.64
Mother_GastroMother tuber of Gastrodia elata 3.62
Mother_JuvenMother tuber of Juvenile 5.60