Detail information of GWHGAAEX002952/evm.TU.scaffold_128.55


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|460369049|ref|XP_004230377.1|1.03E-13PREDICTED: uncharacterized protein LOC101244714 [Solanum lycopersicum]
trEMBLtr|M1BJW6|M1BJW6_SOLTU1.00E-13Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400046945}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013026316552632389-
Transcript Sequence

Network for GWHGAAEX002952

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.110
SRR2545915Juvenile tuber13.610
SRP108465SRR5643513five period of Gastrodia elata24.320
SRR5643514five period of Gastrodia elata23.640
SRR5643515five period of Gastrodia elata68.800
SRR5643524five period of Gastrodia elata35.330
SRR5643525five period of Gastrodia elata12.810
SRR5643528five period of Gastrodia elata50.270
SRR5643658five period of Gastrodia elata9.290
SRR5643659five period of Gastrodia elata68.350
SRR5643660five period of Gastrodia elata50.840
SRR5643661five period of Gastrodia elata52.430
SRR5643662five period of Gastrodia elata58.330
SRR5643663five period of Gastrodia elata32.260
SRR5643664five period of Gastrodia elata38.290
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.920
SRR6049655Rhizomagastrodiae_C368-T10_good_138.280
SRR6049656Rhizomagastrodiae_C368-T07_good_114.210
SRR6049657Rhizomagastrodiae_C368-T07_good_117.620
SRR6049658Rhizomagastrodiae_C368-T04_good_115.230
SRR6049659Rhizomagastrodiae_C368-T04_good_119.230
SRR6049660Rhizomagastrodiae_C368-T01_good_119.630
SRR6049661Rhizomagastrodiae_C368-T04_good_115.730
SRR6049662Rhizomagastrodiae_C368-T01_good_117.620
SRR6049663Rhizomagastrodiae_C368-T01_good_120.740
SRR6049664Rhizomagastrodiae_C368-T10_good_119.630
SRR6049665Rhizomagastrodiae_C368-T10_good_119.630
SRP279888GastroGastrodia elata tuber 26.01
JuvenJuvenile tuber12.39
Mother_GastroMother tuber of Gastrodia elata 117.54
Mother_JuvenMother tuber of Juvenile 95.51