Detail information of GWHGAAEX002955/evm.TU.scaffold_128.59


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG19473.00E-21Leucine rich repeat proteins, some proteins contain F-box
nrgi|743793737|ref|XP_010924002.1|1.15E-111PREDICTED: F-box/LRR-repeat protein At3g48880-like [Elaeis guineensis]
Swissprottr|Q9M2Z5|FBL53_ARATH8.00E-22F-box/LRR-repeat protein At3g48880
trEMBLtr|B4FQK7|B4FQK7_MAIZE9.00E-83Uncharacterized protein {ECO:0000313|EMBL:ACF84400.1, ECO:0000313|EnsemblPlants:GRMZM2G041048_P01}
TAIRAT3G488803.00E-21RNI-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013028676952869324+
Transcript Sequence

Network for GWHGAAEX002955

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.700
SRR2545915Juvenile tuber14.370
SRP108465SRR5643513five period of Gastrodia elata9.330
SRR5643514five period of Gastrodia elata10.440
SRR5643515five period of Gastrodia elata9.700
SRR5643524five period of Gastrodia elata10.880
SRR5643525five period of Gastrodia elata8.420
SRR5643528five period of Gastrodia elata5.330
SRR5643658five period of Gastrodia elata5.780
SRR5643659five period of Gastrodia elata7.670
SRR5643660five period of Gastrodia elata8.180
SRR5643661five period of Gastrodia elata9.170
SRR5643662five period of Gastrodia elata12.760
SRR5643663five period of Gastrodia elata9.950
SRR5643664five period of Gastrodia elata10.400
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.880
SRR6049655Rhizomagastrodiae_C368-T10_good_112.010
SRR6049656Rhizomagastrodiae_C368-T07_good_110.590
SRR6049657Rhizomagastrodiae_C368-T07_good_111.780
SRR6049658Rhizomagastrodiae_C368-T04_good_112.220
SRR6049659Rhizomagastrodiae_C368-T04_good_111.810
SRR6049660Rhizomagastrodiae_C368-T01_good_19.800
SRR6049661Rhizomagastrodiae_C368-T04_good_112.380
SRR6049662Rhizomagastrodiae_C368-T01_good_112.290
SRR6049663Rhizomagastrodiae_C368-T01_good_111.040
SRR6049664Rhizomagastrodiae_C368-T10_good_113.310
SRR6049665Rhizomagastrodiae_C368-T10_good_113.310
SRP279888GastroGastrodia elata tuber 13.92
JuvenJuvenile tuber17.23
Mother_GastroMother tuber of Gastrodia elata 11.66
Mother_JuvenMother tuber of Juvenile 14.31