Detail information of GWHGAAEX002957/evm.TU.scaffold_128.61


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|333984421|ref|YP_004513631.1|3.00E-08phosphoglycerate mutase [Methylomonas methanica MC09]
KOGKOG45133.00E-20Phosphoglycerate mutase
nrgi|3914382|sp|O24246.1|PMGI_PRUDU3.06E-24RecName: Full=2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Short=BPG-independent PGAM; Short=Phosphoglyceromutase; AltName: Full=PGAM-I, partial [Prunus dulcis]
Swissprottr|O24246|PMGI_PRUDU1.00E-262,3-bisphosphoglycerate-independent phosphoglycerate mutase (Fragment)
trEMBLtr|M5WS41|M5WS41_PRUPE3.00E-24Uncharacterized protein {ECO:0000313|EMBL:EMJ09650.1}
TAIRAT3G085903.00E-20Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013028954752895639-
Transcript Sequence

Network for GWHGAAEX002957

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01676.17Metalloenzyme1401.10E-05
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15633gpmI Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Methane metabolismmap00680
Pyrimidine metabolismmap00240

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity
GO:0046872Molecular Functionmetal ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms129.530
SRR2545915Juvenile tuber203.500
SRP108465SRR5643513five period of Gastrodia elata3732.260
SRR5643514five period of Gastrodia elata3874.120
SRR5643515five period of Gastrodia elata3007.910
SRR5643524five period of Gastrodia elata2425.740
SRR5643525five period of Gastrodia elata16395.900
SRR5643528five period of Gastrodia elata8843.650
SRR5643658five period of Gastrodia elata5301.400
SRR5643659five period of Gastrodia elata3697.390
SRR5643660five period of Gastrodia elata4291.010
SRR5643661five period of Gastrodia elata4153.890
SRR5643662five period of Gastrodia elata8915.150
SRR5643663five period of Gastrodia elata2897.930
SRR5643664five period of Gastrodia elata4732.830
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1795.780
SRR6049655Rhizomagastrodiae_C368-T10_good_11094.610
SRR6049656Rhizomagastrodiae_C368-T07_good_1707.470
SRR6049657Rhizomagastrodiae_C368-T07_good_1537.970
SRR6049658Rhizomagastrodiae_C368-T04_good_1265.190
SRR6049659Rhizomagastrodiae_C368-T04_good_1177.590
SRR6049660Rhizomagastrodiae_C368-T01_good_1718.570
SRR6049661Rhizomagastrodiae_C368-T04_good_1509.610
SRR6049662Rhizomagastrodiae_C368-T01_good_1727.010
SRR6049663Rhizomagastrodiae_C368-T01_good_1642.060
SRR6049664Rhizomagastrodiae_C368-T10_good_1608.000
SRR6049665Rhizomagastrodiae_C368-T10_good_1608.000
SRP279888GastroGastrodia elata tuber 20,202.87
JuvenJuvenile tuber31,233.03
Mother_GastroMother tuber of Gastrodia elata 34,263.50
Mother_JuvenMother tuber of Juvenile 43,127.93