Detail information of GWHGAAEX002960/evm.TU.scaffold_129.5


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG07009.00E-170Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase
nrgi|672199089|ref|XP_008777523.1|0PREDICTED: probable protein phosphatase 2C 43 [Phoenix dactylifera]
Swissprottr|Q7XUC5|P2C43_ORYSJ0Probable protein phosphatase 2C 43
trEMBLtr|U5D9P8|U5D9P8_AMBTC0Uncharacterized protein {ECO:0000313|EMBL:ERN17098.1}
TAIRAT5G067509.00E-170Protein phosphatase 2C family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000132157961174514+
Transcript Sequence

Network for GWHGAAEX002960

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00481.20PP2C383138.40E-39
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0043169Molecular Functioncation binding
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.180
SRR2545915Juvenile tuber11.550
SRP108465SRR5643513five period of Gastrodia elata10.320
SRR5643514five period of Gastrodia elata7.950
SRR5643515five period of Gastrodia elata11.900
SRR5643524five period of Gastrodia elata6.630
SRR5643525five period of Gastrodia elata17.810
SRR5643528five period of Gastrodia elata12.980
SRR5643658five period of Gastrodia elata22.230
SRR5643659five period of Gastrodia elata8.510
SRR5643660five period of Gastrodia elata8.850
SRR5643661five period of Gastrodia elata8.200
SRR5643662five period of Gastrodia elata11.510
SRR5643663five period of Gastrodia elata8.160
SRR5643664five period of Gastrodia elata9.430
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.750
SRR6049655Rhizomagastrodiae_C368-T10_good_17.980
SRR6049656Rhizomagastrodiae_C368-T07_good_17.970
SRR6049657Rhizomagastrodiae_C368-T07_good_110.800
SRR6049658Rhizomagastrodiae_C368-T04_good_112.480
SRR6049659Rhizomagastrodiae_C368-T04_good_113.070
SRR6049660Rhizomagastrodiae_C368-T01_good_111.180
SRR6049661Rhizomagastrodiae_C368-T04_good_111.090
SRR6049662Rhizomagastrodiae_C368-T01_good_17.580
SRR6049663Rhizomagastrodiae_C368-T01_good_19.490
SRR6049664Rhizomagastrodiae_C368-T10_good_19.110
SRR6049665Rhizomagastrodiae_C368-T10_good_19.110
SRP279888GastroGastrodia elata tuber 9.14
JuvenJuvenile tuber5.20
Mother_GastroMother tuber of Gastrodia elata 18.53
Mother_JuvenMother tuber of Juvenile 11.23