Detail information of GWHGAAEX002962/evm.TU.scaffold_129.8


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG13002.00E-31Vesicle trafficking protein Sec1
nrgi|147773377|emb|CAN73440.1|2.23E-34hypothetical protein VITISV_016082 [Vitis vinifera]
Swissprottr|Q9C5X3|KEULE_ARATH8.00E-32SNARE-interacting protein KEULE
trEMBLtr|A5AIK1|A5AIK1_VITVI8.00E-35Putative uncharacterized protein {ECO:0000313|EMBL:CAN73440.1}
TAIRAT1G123602.00E-31Sec1/munc18-like (SM) proteins superfamily

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000132208211214520-
Transcript Sequence

Network for GWHGAAEX002962

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00995.22Sec110636.50E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15292STXBP1, MUNC18-1 Synaptic vesicle cycle map04721

Gene Ontology

GO term OntologyName
GO:0006904Biological Processvesicle docking involved in exocytosis
GO:0016192Biological Processvesicle-mediated transport

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata0.000
SRR5643514five period of Gastrodia elata0.000
SRR5643515five period of Gastrodia elata0.000
SRR5643524five period of Gastrodia elata0.000
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.000
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_10.000
SRR6049657Rhizomagastrodiae_C368-T07_good_10.000
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.000
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.000
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_10.000
SRR6049665Rhizomagastrodiae_C368-T10_good_10.000
SRP279888GastroGastrodia elata tuber 0.00
JuvenJuvenile tuber0.00
Mother_GastroMother tuber of Gastrodia elata 0.00
Mother_JuvenMother tuber of Juvenile 0.00