Gene detail

Detail information of GWHGAAEX002964/evm.TU.scaffold_129.10

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743779448\|ref\|XP_010920191.1\|	0	PREDICTED: uncharacterized protein LOC105044092 [Elaeis guineensis]
trEMBL	tr\|A0A061DZF4\|A0A061DZF4_THECC	0	Uncharacterized protein {ECO:0000313\|EMBL:EOX97752.1}
TAIR	AT4G38750	1.00E-119	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000132	303723	440723	+

Transcript Sequence
>GWHTAAEX002964 GCGGGCTATCCTAGTAGGGCATTTCTATCAGTGATTTGTGAGAAAGAAGAGGGGTATTTGCTCCTCGCTTGGCCATGGCTAGCACTCCCGCGGAAGGCAGTTCCTCCAGCCCCATTAACACTACCGCCGCTGCAAAAGCCACAGTTGCGGTTAATGCAACCGCCACGTCGACTGGTCCCAAGCCTTTAGACGAATCATTCTGGTGGGATTCCTTCGTCGTCCTCTTAGAAGAACTTGAAAACGCATTTTCTTTCTCTGAACCTGGCAATATCACTTTAAATAAGCTCAAGATAAATCACGCTTGGTTCTTGGAATCGATTACACTCTTCAAACTTCCGAACGAGGCCTCTAGGCGTGCATTGGATTCCAATGAGATATCCATTGGCTTACACAACATTGTCATAGAGCCAAGGCTAAAGGAAGCTGCGCTCCGGGCTAGCAAATTTCTGAACTTGGATGAAGTGCAGACCTACATTTTGGTTAGCAGGTCTGTCGAACACAAGGGATCTATTGCTTGTGTCGAAGAAGAAAAATTTGTGCATTGGGTACTGCTACACTATTTTTTTGAGCGACAATGTTTGTTGAAGTGCACTAGGCGTATTTTTGTGAATTCTTTAAGTGCGAACAACAGGGCTCACTCAAGTAATGCATTTAAAGAGGAGGCTATGCAATTGATTCATGATAGGCTGGATATAAAATTGTTATCTGTCCTTCGGGATCTTCTTTCATATGTACCTTCTGAAAAATTTCTGCAGGATGTTGAATTGGTTGCAGTTTTGGTGGATGAAACTATTATTGAAGATGTCTTGATTTTGGATATTTTATTCTTGGCTTACTATGATAATTTTTGTGTCTGTAATGCTGAGCAATGGATGTGCTTATGCACACTATTCAAGGGTATGCTCGATTGTTCATATGAAATGGAAAAATTGGCTGTTTCAATGGACGCAAGAGCTTCCTTTACACATGCTAAGGTTCAGCTACTACTCATTCTTATTGAAACTTTAGATCTGGAAAATCTTCTTCGCATGGTTCATGATGAAGTGCCTTTTAGCGAGGGCGGTTCTATTTTTTCCGTGCAAGATATCAAGAAAATGGATTTTCTCATTTCCAACCTTTCTGCACTAGGAGCAATTGAATCTGGGCCTTTATTTCTTGCCTGGGCGGTTTTTGTTAGTCTGCTTTCATCACTTCCTGATATTAGAAATCATCATAATCTCATGGAAGTTGATCATGTTGAGTATGCTCGTCAAGCATTCGAGGTTGGAACATTCAGCTATTTGGTTGATGTTCTCCGCAGTGACTGTTTTAAGAACTCAGACGGTCCAATTTCTGGCTTTTTGAATATATTAAGAACATTGATGTCTGCATTTATAGCTTCTTATGAACTTAGTCATCAGCCAGAAAAGACACTGAGCATGATTTTGGAAATACTTAGTGAAATTTATCATGGGGAGGAATCCCTTTCTATTCAGTTCTGGGATAGAGATAGTTTTGTTGATGGGCCAGTGCGATCTTTGCTTTATATGCTAGAAAGTGAATACCCATATCATGTTAATGAACTACTTCGATTACTATCAGCTCTTTGCAATGGATCTTGGTCTGCAGAGTGTGTTTACAATTTTTTGGATAAAATGAATGGTATGACGCTGTTATTCGAGGGCCCTAGTGATTATCCACCTATGAATGTTTATGACATAATTGAAGCCCATCAGAAAATCCCAGTTCCTGGTGCTGAAGGTATTTCTATCTCACCTGGATGCCGTGGTCAGATTTTGAAGGTTATTGGTTTCAATGTTGCGCTTGCTCGTTGGGAGTGTGCTCATTCAGGAATTTATCTCTTAGTCTTGCGCTTGGCTCTAGTGTCTCATTCAAATGGGCGTGATGAAGTTACTATTATTCTTAACCTACTTTATAAGCTGCTTTCATTTAATGAGGCTGTTGGTTTTAATTTACTGCATTTGGACAAATCCTTGTTCTCCAAAGCAGCTAAAAAAAATGGACTTATTGAACCAAATATGTGCATTGATGTAGTGAAGATAATCAGCTCCTTGGCTGTTCTATTCCTTGAAAATGCTGGATCTGCAAGCACTATTGGCTTATGTCTCAATATTTTGGCTGAGATGTTGAAGTATGCGCCTTCTCATGTTATTGATACAGTGTTTAGTTCAAATGTATTTGGTACAACAAGTGTTACTTCATCAAGTGATGCATGGCTACTTTCTGGTGGGCTTTCTCAATTGCTTTTTGCCAACCATATGGAGGAAAGTGGATGCTCTTTGTTGACGTTGGCAGTGCTTAACTTAACAAACCAGCTTATTGAGAAAGGCACAGGGGATGCATTAGTTTGTGCACTAGTTGTGTTTTCTCTGCAATATGTTTTTGTTAACCACATGCATGTATACAAGGTGAAGAATGGGCATTGGAAAGTTACTTTGAAGGTTTTAGATGTGATGAGAAGCTGTGTTAAAAGAGTTCAGGGTTCTCACAAGTTTGCCTCCATGATCCGGGACATTTTGTATTTTGACTCATCTATTCATAATTGCTTGTGCCAGCTTTTACATGTATCTGAACAAGCATTGAAGAAATCAAGTCTAAGCTACTATTATAGCTTGAAGGAAACTGAATACTTGCAAAATGCTGCCTGCATTGCACTGGAGGTTGTCTATTTTTTGTTGGATGATGTCCTCAAGGGATCATTTTTCACGCCACCGCCTTTGGTTCAAATATTACTGCCATGGTCAAGCAAGAGTGTCTCTGTTTTCACAATCACGTCATCATTGATGAGCTTATTTTCAAATCCAGAAGTTCAAGTGGTTTCAACTAAAGTTCTTTCCCTACTCTGTGCTTTGGCATCACGACTACAACCGTATTCGCTAGAGAATATTACTCTTCTAGATGCTGTGCAGATTAATGAATTAACTGCTACCATCTGCCTCAATTTAGATGAGGAATCATGTAGAAGAAAGAGTCTTCTTATCTCTACACTCGACCTTCTTGTCTCTGCTGCTTATTTTCAGCCTTCTCTTCTGCTACCCTTAATCTCATCACATGTAGAAGAAGAGGGTTCAAGGGAAACTGGTGGAGAAGTTATTAACAAATTTTTGAAGGTGCCTCTTGTCTACCCAATTTGTTCTAGAAGATGCATCATTGATGCAATCCTGAAATTTGTTAATGCATCTGAGCTTCTTATTAAAAGTGATCCAAGATTATTGATGAGTACTCTCAAATTCTTAAAGTCATTATGGGATGGCGGTGCTCCATATATGGAAATGTTAGAGAAGGTTAGAAAGTCTGTTGGGTTCTGGGAGCGTTTATCTTCTATACTTTTAAACAGAATTAACCATGACAACACTCTAAAAAATCTGAGTGATGATGACATTCTGCATGTTGCTTATCAGTACCGTTGTCAAGGAATTGTCTTAGAAATCATGTCGCGGGAACTTTATTTGCTAGATAAGGTATATCAAAATGAGATGTATGAAAAGCAGGCTTCAAAACGTAGCTTGAAAGGACATGATGAAAGTCTATTGGACTTTGACGCTTCTCAATCTTTGATTAAACTCCTGAAAAACATTTTATCAAACTGGCATGATGGCTCCACAATTGATACGATTATGAAATCATATTCTTCTGGTGGATATGATTTGCAAATTGTTTCCCATGCTAAGATTGCTGCTTGTTTATTAATTGTTCATCTAATGCTTGCACTGTCAAGTGGCAGTGCGGAATGCCTATCCATATCGTTGATTGGGAGGATTCGCTCAATGCAAGACAAGTTGAGACAGAATTCTTCTTTTTGTTCCCTAGTTGAACAATACTCCTTCCAAGGCTACAGTGAAGGAAAGGATGTGAACAGTCTTGTGCTCCATGATCTTTATTACCACCTTAAGGGAGAGCTGGAGGGCCGATTAATTGCTCCAGGCCTTTTTCAAGACCTTTCAGATTTCCTTCTTAACTTTGAAACTTTCCAATGTAGAGAAAGCAAGAATGAAGATGATTTTTGGAATACTAATTTAATGATGTATGACATTCCGAGCACAAGGGCTGAACTTGGAATGGATCTGTGGGATAATTCAGAGTGGAAGACAACTAAAGAAATTGGTGAGAAGATGCTGTCTCGCATGCAGGCGGCCAATCTAATGATATCTTTAGCAGATGCCAAGTATTTTGCTTTGAGAGCTTTAGTTTCTATCATTTCATTGTACCATGGAAAGGCTTCCAAAGCAAAATCAATACAAAGTAGCCAAGAAATCTCCGATGCATTTGTAGAGTGGAGTATTAAACATTTTTGCAAATGCATGCAGTCTGTAGCAGATTCAATTGCTCCGCTTTTAAACCCTTCCGAGAAATTGCTAGAATTTCTTGCAGTGCATGGAAAAATGCTGCTTGTTCTCTCTAAAATCTTATTCTCGGAACATTCTCACAGAACCAACAAGCAAGAATTTTCTGTTTCAATATTTCTCATAAAAACATATGGCGCATGTTTCAAGTGCCTGGCTGCTGTCAGGCCGTCCAGTTGTCTAACAAAAGCTGTGAAGCTTCTTCTTATTGCCCTGTTGATAACTCTTGAAAATATTATTCCGGCTGAATCAATAAATGACGAGAATCAGTTTACTGAAGCATCTTCTGCAGTTTCTGGACTCTTGCCTGTCCTTTGCAAGTATGTTGAGCATGTTGAATGCTTTGATCTGTCTGTTTCTTTAATGGACTTGATGCTCAAGTGTTTTTTGACCCCTGAAATTTGGCTTCCAGTTCTAAAGGAGAATCTCCCTCTGAAGCATCTTATCCAAACTGTATGTCAAAGGAGCTCAATTGTTTCAGTTGGAATAACCTTAAATTTTTTCTTAACATTGGTGCAGACGAAAGGCGGTGCTGAAATGCTTCATTCTGTCAATCTTTTCTCTTCTCTCAAGATATTATTTGGCCAACTCGTGGATGAAAAGCTTAACGGCAAGTGCTCACGGCTCGTGGGCCTTTCCTTTGCAATAATCTCCTCCGTACTTCATTCCCTGCAAGATGATTCTTCTGTTAATGATATTTTTGAGAGTGCTGTGCACAGCTTCCTCATCAATAAGCCCAATGCAATTTCATCATGTCTTTCTGTGCCAAGCTTTCCTTCTGATGTTGGAATTAAGGTGACTCGAAATCAGGACCCTCTGACATCTTTGGCAAGTCTCAGGCTTTCTGAACAAGCTCTCTCACTCATTTGTCTGCTGGCTGAACGACGAGAATATCGAAGGAAAGGCATGAAGGAATTAGATGTTGATCTGAGACAGAGAAGCATTCATTTTTTGGCCTTTATAAGCAAGGAAGCACAGCATGCTGGGAGCCTGTCATCTAAAGGATCAACACCTGTTTTCTGCTTGCCAACTTTAAGAGAGGAGCTCGAGTGGAATTACAAACCTTCTTTTGTTAGCAGCAAACATGGATGGTTTTCGGTTTCTGCTCATGTTGCGTCATCAAGAAGTAAAGCTAGCGGCCAAGATGGTGTAAATCAACCAACATATTTTTCTGATCTTGTGGCTGTTCAAATCTATAGGGTCGCATTTCTGCTTTTAACATTCTTATGCATCCAAGCGAAAGCCGCTACTGAGAGGGCGGCTGAGCTTGGGTATATTGATCTCATGCGTTTCCCTGATCTCCCCATGCCTGAGATATTGCATAGCCTGCAGGACCAATCAATCGCCGTTGTTGTCGATGTGTGCAGTGCAAAGCCTTCGGATCTTCCTGCAGAAACTCAGAGCGCCTGCCTTTTAATGCTTCAGATATTGGAGAAATCCCTCTACCTGGAGTTCTGTGTGACCCAGTCATGTGGCATCAGGCCCGTACTTGGACGCGTAGAGGACATTTCCACCAGAATTAAATCCTTGATGCAAGTAGTCAAGCAGCGTAAGCATTTGAGAGCTTCACTGGCTTCGCTGACGCAGATAATAGCGCTTGTTTACCCTGGAATAATTCAGTGTTCGACTAATATTGCCGTGTGGAATAAATTCTTGATGGGGCCTTCGCACATTTCTGGAATGCTCATATTCAAGAATGTTGTGCTGAAAATATCTCATAATAATGGATCCACATGCAAGAATGATGTTAGATTGTGCTGGGAACATAGATTTTTTTCATTTGTGTTAGGATCTTGACTTGTGTTCGTTCTAGAGCAGATATTTTGATGTTTGCATGCCTATAGCTGAATAGATCATGCGAGCATGGGTTGTTTTTCGGATGTTGACCAGTAGCTGCTTATATGTTATCAGTAGCCATAAATAGTTCAATGAGGTTTTACCATATTTGCGCACCTAAAGTCAACCAAGAAATGTCTTATTGGCACATCATTCTTCGCTCTTTTCTTACACCACTTCCTTTTAAAGGAACCAAATGTATGTGACTGATCATCCGCGTTGAGATCTAATGCACGTAAACAATATATCAAAATAATCTATGGTGATCGCAAATTGGGCTGCGAAGTTCTGTTTCTATGCTGATTCTGTTGTTTGCTACCAACTATTGCTGCAACATGTGGATCAACATCCTTGAAGTGAGGATAGCAGTTTGGATTCTTATGAACTGATGGCGTGCTGGTTGATTTCCACTGGGCAATACAACATATTCTCTCATGGCAATGTAATGTGCATAAAAGTGTATTGAAACCTTTGCTAAAGTAGTCTTGGGCAAGTGTTAGAAAAATCAAGAAAATTTGTTATGTCAAGGAACAGATAAGAGCGTACCAATTCATGTGCTACCAAAGATGGTGTTGGGATAGCGAAAGGGAAGGCAAAGTGATGGTGGAAGCAAAGGCAAAGGCTATAGTACCTCGCTTTCCTGGAGCTCTCTCCTTCGATCTCTGGCTGTTTTCTTGCTGTTTTCTTTCGATTTTTCAGGTTTTTCACATTTAAGGTCGTGATCTTTCGAGTCGTGCTGACTTTTTTGAATAATAAACAACAAAAATTTTAGAGCGGCCTGTGAGCTATTGGGTTTACATTTCTTAGTTCTGTAATTCACTCTTGTTGGTATATTATAAAATGGAAAACCTTGAAAGCAAGAAATACAAAAGTTTTAATGACCTAGGCTTATTGAGCTCTTATAATGTGGGATTGTTAGATAGCAGGCATGTTCTGATAACATATAATGTTTTCTCAAGGTATTTATTGTATAAAGGCTTCCAAGTTTTTGGGAGTTTGAACCAT

Network for GWHGAAEX002964

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX002964
MASTPAEGSSSSPINTTAAAKATVAVNATATSTGPKPLDESFWWDSFVVLLEELENAFSFSEPGNITLNKLKINHAWFLESITLFKLPNEASRRALDSNEISIGLHNIVIEPRLKEAALRASKFLNLDEVQTYILVSRSVEHKGSIACVEEEKFVHWVLLHYFFERQCLLKCTRRIFVNSLSANNRAHSSNAFKEEAMQLIHDRLDIKLLSVLRDLLSYVPSEKFLQDVELVAVLVDETIIEDVLILDILFLAYYDNFCVCNAEQWMCLCTLFKGMLDCSYEMEKLAVSMDARASFTHAKVQLLLILIETLDLENLLRMVHDEVPFSEGGSIFSVQDIKKMDFLISNLSALGAIESGPLFLAWAVFVSLLSSLPDIRNHHNLMEVDHVEYARQAFEVGTFSYLVDVLRSDCFKNSDGPISGFLNILRTLMSAFIASYELSHQPEKTLSMILEILSEIYHGEESLSIQFWDRDSFVDGPVRSLLYMLESEYPYHVNELLRLLSALCNGSWSAECVYNFLDKMNGMTLLFEGPSDYPPMNVYDIIEAHQKIPVPGAEGISISPGCRGQILKVIGFNVALARWECAHSGIYLLVLRLALVSHSNGRDEVTIILNLLYKLLSFNEAVGFNLLHLDKSLFSKAAKKNGLIEPNMCIDVVKIISSLAVLFLENAGSASTIGLCLNILAEMLKYAPSHVIDTVFSSNVFGTTSVTSSSDAWLLSGGLSQLLFANHMEESGCSLLTLAVLNLTNQLIEKGTGDALVCALVVFSLQYVFVNHMHVYKVKNGHWKVTLKVLDVMRSCVKRVQGSHKFASMIRDILYFDSSIHNCLCQLLHVSEQALKKSSLSYYYSLKETEYLQNAACIALEVVYFLLDDVLKGSFFTPPPLVQILLPWSSKSVSVFTITSSLMSLFSNPEVQVVSTKVLSLLCALASRLQPYSLENITLLDAVQINELTATICLNLDEESCRRKSLLISTLDLLVSAAYFQPSLLLPLISSHVEEEGSRETGGEVINKFLKVPLVYPICSRRCIIDAILKFVNASELLIKSDPRLLMSTLKFLKSLWDGGAPYMEMLEKVRKSVGFWERLSSILLNRINHDNTLKNLSDDDILHVAYQYRCQGIVLEIMSRELYLLDKVYQNEMYEKQASKRSLKGHDESLLDFDASQSLIKLLKNILSNWHDGSTIDTIMKSYSSGGYDLQIVSHAKIAACLLIVHLMLALSSGSAECLSISLIGRIRSMQDKLRQNSSFCSLVEQYSFQGYSEGKDVNSLVLHDLYYHLKGELEGRLIAPGLFQDLSDFLLNFETFQCRESKNEDDFWNTNLMMYDIPSTRAELGMDLWDNSEWKTTKEIGEKMLSRMQAANLMISLADAKYFALRALVSIISLYHGKASKAKSIQSSQEISDAFVEWSIKHFCKCMQSVADSIAPLLNPSEKLLEFLAVHGKMLLVLSKILFSEHSHRTNKQEFSVSIFLIKTYGACFKCLAAVRPSSCLTKAVKLLLIALLITLENIIPAESINDENQFTEASSAVSGLLPVLCKYVEHVECFDLSVSLMDLMLKCFLTPEIWLPVLKENLPLKHLIQTVCQRSSIVSVGITLNFFLTLVQTKGGAEMLHSVNLFSSLKILFGQLVDEKLNGKCSRLVGLSFAIISSVLHSLQDDSSVNDIFESAVHSFLINKPNAISSCLSVPSFPSDVGIKVTRNQDPLTSLASLRLSEQALSLICLLAERREYRRKGMKELDVDLRQRSIHFLAFISKEAQHAGSLSSKGSTPVFCLPTLREELEWNYKPSFVSSKHGWFSVSAHVASSRSKASGQDGVNQPTYFSDLVAVQIYRVAFLLLTFLCIQAKAATERAAELGYIDLMRFPDLPMPEILHSLQDQSIAVVVDVCSAKPSDLPAETQSACLLMLQILEKSLYLEFCVTQSCGIRPVLGRVEDISTRIKSLMQVVKQRKHLRASLASLTQIIALVYPGIIQCSTNIAVWNKFLMGPSHISGMLIFKNVVLKISHNNGSTCKNDVRLCWEHRFFSFVLGS

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K14311	NUP188	RNA transport	map03013

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	35.500
SRP064423	SRR2545915	Juvenile tuber	33.950
SRP108465	SRR5643513	five period of Gastrodia elata	10.170
	SRR5643514	five period of Gastrodia elata	10.520
	SRR5643515	five period of Gastrodia elata	9.150
	SRR5643524	five period of Gastrodia elata	8.740
	SRR5643525	five period of Gastrodia elata	5.470
	SRR5643528	five period of Gastrodia elata	3.900
	SRR5643658	five period of Gastrodia elata	5.710
	SRR5643659	five period of Gastrodia elata	13.030
	SRR5643660	five period of Gastrodia elata	14.300
	SRR5643661	five period of Gastrodia elata	12.090
	SRR5643662	five period of Gastrodia elata	14.880
	SRR5643663	five period of Gastrodia elata	15.620
	SRR5643664	five period of Gastrodia elata	17.240
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	16.660
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	11.680
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	13.750
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	19.980
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	20.290
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	23.860
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	18.620
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	18.970
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	12.960
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	15.480
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	9.700
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	9.700
SRP279888	Gastro	Gastrodia elata tuber	20.64
	Juven	Juvenile tuber	17.42
	Mother_Gastro	Mother tuber of Gastrodia elata	8.33
	Mother_Juven	Mother tuber of Juvenile	13.51