Detail information of GWHGAAEX002967/evm.TU.scaffold_129.14


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|269929194|ref|YP_003321515.1|2.00E-109Amidase [Sphaerobacter thermophilus DSM 20745]
KOGKOG12112.00E-150Amidases
nrgi|743779438|ref|XP_010920186.1|0PREDICTED: putative amidase C869.01 [Elaeis guineensis]
Swissprottr|B6U151|GATA_MAIZE1.00E-29Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial {ECO:0000255|HAMAP-Rule:MF_03150} (Precursor)
trEMBLtr|W9QKJ3|W9QKJ3_9ROSA0Putative amidase {ECO:0000313|EMBL:EXB39270.1}
TAIRAT4G348802.00E-150Amidase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000132492551495955+
Transcript Sequence

Network for GWHGAAEX002967

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01425.20Amidase635052.30E-63
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01426E3.5.1.4, amiE Metabolic pathways map01100
Microbial metabolism in diverse environmentsmap01120
Arginine and proline metabolismmap00330
Phenylalanine metabolismmap00360
Tryptophan metabolismmap00380
Aminobenzoate degradationmap00627
Styrene degradationmap00643

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.450
SRR2545915Juvenile tuber1.340
SRP108465SRR5643513five period of Gastrodia elata1.220
SRR5643514five period of Gastrodia elata472.100
SRR5643515five period of Gastrodia elata96.540
SRR5643524five period of Gastrodia elata419.760
SRR5643525five period of Gastrodia elata0.670
SRR5643528five period of Gastrodia elata4.100
SRR5643658five period of Gastrodia elata0.800
SRR5643659five period of Gastrodia elata1.320
SRR5643660five period of Gastrodia elata0.970
SRR5643661five period of Gastrodia elata1.110
SRR5643662five period of Gastrodia elata0.660
SRR5643663five period of Gastrodia elata0.480
SRR5643664five period of Gastrodia elata1.080
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_127.050
SRR6049655Rhizomagastrodiae_C368-T10_good_1115.970
SRR6049656Rhizomagastrodiae_C368-T07_good_1168.590
SRR6049657Rhizomagastrodiae_C368-T07_good_122.690
SRR6049658Rhizomagastrodiae_C368-T04_good_115.250
SRR6049659Rhizomagastrodiae_C368-T04_good_113.140
SRR6049660Rhizomagastrodiae_C368-T01_good_17.290
SRR6049661Rhizomagastrodiae_C368-T04_good_113.950
SRR6049662Rhizomagastrodiae_C368-T01_good_169.990
SRR6049663Rhizomagastrodiae_C368-T01_good_122.940
SRR6049664Rhizomagastrodiae_C368-T10_good_122.260
SRR6049665Rhizomagastrodiae_C368-T10_good_122.260
SRP279888GastroGastrodia elata tuber 0.37
JuvenJuvenile tuber0.49
Mother_GastroMother tuber of Gastrodia elata 271.10
Mother_JuvenMother tuber of Juvenile 441.22