Detail information of GWHGAAEX002970/evm.TU.scaffold_129.18


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|186686511|ref|YP_001869707.1|2.00E-56glycoside hydrolase family protein [Nostoc punctiforme PCC 73102]
nrgi|743779397|ref|XP_010920164.1|0PREDICTED: uncharacterized protein LOC105044067 [Elaeis guineensis]
trEMBLtr|M0SXM2|M0SXM2_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P11430_001}
TAIRAT4G386500Glycosyl hydrolase family 10 protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000132609830614410+
Transcript Sequence

Network for GWHGAAEX002970

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00331.19Glyco_hydro_102264908.40E-40
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyCBM22

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005975Biological Processcarbohydrate metabolic process
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compounds

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.890
SRR2545915Juvenile tuber5.380
SRP108465SRR5643513five period of Gastrodia elata16.150
SRR5643514five period of Gastrodia elata15.020
SRR5643515five period of Gastrodia elata12.430
SRR5643524five period of Gastrodia elata12.600
SRR5643525five period of Gastrodia elata11.900
SRR5643528five period of Gastrodia elata22.990
SRR5643658five period of Gastrodia elata13.210
SRR5643659five period of Gastrodia elata5.740
SRR5643660five period of Gastrodia elata4.560
SRR5643661five period of Gastrodia elata6.110
SRR5643662five period of Gastrodia elata6.520
SRR5643663five period of Gastrodia elata5.980
SRR5643664five period of Gastrodia elata5.800
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.090
SRR6049655Rhizomagastrodiae_C368-T10_good_118.020
SRR6049656Rhizomagastrodiae_C368-T07_good_118.710
SRR6049657Rhizomagastrodiae_C368-T07_good_112.650
SRR6049658Rhizomagastrodiae_C368-T04_good_114.230
SRR6049659Rhizomagastrodiae_C368-T04_good_112.250
SRR6049660Rhizomagastrodiae_C368-T01_good_112.760
SRR6049661Rhizomagastrodiae_C368-T04_good_114.000
SRR6049662Rhizomagastrodiae_C368-T01_good_124.100
SRR6049663Rhizomagastrodiae_C368-T01_good_123.450
SRR6049664Rhizomagastrodiae_C368-T10_good_125.680
SRR6049665Rhizomagastrodiae_C368-T10_good_125.680
SRP279888GastroGastrodia elata tuber 6.43
JuvenJuvenile tuber5.41
Mother_GastroMother tuber of Gastrodia elata 68.05
Mother_JuvenMother tuber of Juvenile 15.29