Gene detail

Detail information of GWHGAAEX002971/evm.TU.scaffold_129.19

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|702482340\|ref\|XP_010033495.1\|	9.74E-91	PREDICTED: thaumatin-like protein 1b [Eucalyptus grandis]
Swissprot	tr\|Q9FSG7\|TP1A_MALDO	1.00E-64	Thaumatin-like protein 1a (Precursor)
trEMBL	tr\|A0A059AHK9\|A0A059AHK9_EUCGR	4.00E-91	Uncharacterized protein {ECO:0000313\|EMBL:KCW53156.1}
TAIR	AT2G17860	3.00E-87	Pathogenesis-related thaumatin superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000132	616337	618112	-

Transcript Sequence
>GWHTAAEX002971 CAATTACTTTTAAAAAATAAGAAATTATTTGAACTAGTTCTTCATTAATTTAAGAAGATAAATCTTCCTTTCCCATGCCTAAATAACGCTCTCTTCGGGGTCAGTCCAGTTCCCCAACCTCTCTTCCACTTCTTGTCACTTGTCCGCAAAAACCGAAGGAGAAAAACCGCGGAATGGCCAAACTCCAATCCCTCCCCTTCTTCCCCCTCTTCGCTCTCCTCTGCTTCTCCCCCGGTACAATGTCCACCACTTTCACCATCTCCAACGGCTGCAGGTTCACGATCTGGCCTGAGATCCTCTCTGGTGCGGGAACCCCCCCTCTCAACAGCACGCCCTTTTCCCTCCCCTCAGACAATTTCTTCCTCCTCGAAATGCCCCCTTTCTGGTCAGGCCGCCTTTGGGCCCGCACCGGCTGCTCCTCCGACCCCGCCACCGGTCTCTTCTCCTGCGCCACTGGCGACTCCCCTCCGGCCACCCTCGCCGAGTTCACTCTCCACGGAAGCGGTGGCCTCGACTTCTTCGACGTCAGCCTCGTCGACGGCTACAACCTCCCCGTCCTCGTCTCCCCCTCCCCCGCCGCCGGCGCCGGGAAATGCACGCCCGCTGGATGCGCCGCCGACATCAACGGCAACTGCCCCTCCGATCTTCGGGTGACCGCCGCCTCGCCGGATGGCGCCGCCTGCCGCAGCGCCTGCGGGGCCTTCAACACCCCGGAGTTCTGCTGCAGCGGGGACTACAGCAACCCCGACACCTGCAGGCCTTCTTCCTACTCTCTGTTTTTCAAGAGCGCCTGCCCCAGAGCTTACAGCTATGCCTACGATGACGCGTCTTCTACGTTCACTTGTGCCGCCGGCGTCGATTATCTCATCACCTTCTGTCCCACCTCTGTTAGGTATTGAATTCTGAAATCTGAACTCTATTTTCTTGGATTTTTTTTGGACGTAGGGTTTAAGAAACGCGCGAGCTTAGAGCGGTGCTCGATTAAAAATTACGCTTTTGAGGGAGTTTTTCCGACCTGTATCTGAAATCTTTCTCAGTTTTTCCTGATTTTTCTGGGGTTAGGGTTTAAGAAAAGTGCGAGCTTGAAATTGAAAAATTACGATCTTGAGCATTAGCTTGAACAGATCGACGGAATTTTTTGGAGCTGCTGCATCAATTTCATTTCGTAGAGACGTCACCTCTTTGATTGATCAACGTTATCCTTTACTTTATTCCACCGACTGACAGCTTTAGCTTCAAAAAAGATAATGTTTTTTACTCTGATAGAATCGAATCGAAATGAAATGAAATGAAATGAGTTGAATTGAATTGGTTACAGCAAGAGGGCTGATTCAAAAAACCCTATTGCCACCGGCATTCCGCTGATCAACGATACGATGATGTTCTTCGGGCCGGTTACAGGCGGTGCTGCGGCGCGCTCAGGCTCATTTTCAAACCAAAGACGCATTTTTCTTCTTTTGAATATATTTGTGATTGGGGCGGCGTTGGGATAATCGAGGTGGGCCGCTGCTCGGAAAGGCTGACTTTTTGAACGCGAAGAAGAAGACCTCTGCCGCGCGGATATTGCTGTTTCATTTTTCTCGTTTAAGGTTTATTATATTGCATTAATTAATTAAAGAAAAAAGAAAAAAGCTGTTATGGCGCTCAAATAATTGTTTAAATTGCAACGCAATCAAAAAAAGGTGATTTTTTCC

Network for GWHGAAEX002971

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00314.16	Thaumatin	31	236	4.40E-70

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	6.730
SRP064423	SRR2545915	Juvenile tuber	4.560
SRP108465	SRR5643513	five period of Gastrodia elata	8.420
	SRR5643514	five period of Gastrodia elata	3.730
	SRR5643515	five period of Gastrodia elata	9.000
	SRR5643524	five period of Gastrodia elata	4.970
	SRR5643525	five period of Gastrodia elata	5.640
	SRR5643528	five period of Gastrodia elata	4.320
	SRR5643658	five period of Gastrodia elata	8.280
	SRR5643659	five period of Gastrodia elata	4.670
	SRR5643660	five period of Gastrodia elata	4.920
	SRR5643661	five period of Gastrodia elata	5.310
	SRR5643662	five period of Gastrodia elata	10.410
	SRR5643663	five period of Gastrodia elata	7.820
	SRR5643664	five period of Gastrodia elata	11.720
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	3.990
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	7.970
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	2.960
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	3.790
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.130
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	3.790
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.770
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	6.080
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	3.890
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	3.140
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	5.350
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	5.350
SRP279888	Gastro	Gastrodia elata tuber	6.03
	Juven	Juvenile tuber	1.21
	Mother_Gastro	Mother tuber of Gastrodia elata	11.61
	Mother_Juven	Mother tuber of Juvenile	1.61