Detail information of GWHGAAEX002972/evm.TU.scaffold_129.20


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695005836|ref|XP_009389382.1|7.81E-70PREDICTED: uncharacterized protein LOC103975956 [Musa acuminata subsp. malaccensis]
trEMBLtr|M0S6G8|M0S6G8_MUSAM3.00E-70Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P09270_001}
TAIRAT4G294802.00E-63Mitochondrial ATP synthase subunit G protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000132619270647574+
Transcript Sequence

Network for GWHGAAEX002972

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04718.14ATP-synt_G151209.60E-23
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02140ATPeFG, ATP5L, ATP20 Metabolic pathways map01100
Oxidative phosphorylationmap00190
Thermogenesismap04714

Gene Ontology

GO term OntologyName
GO:0015986Biological ProcessATP synthesis coupled proton transport
GO:0015078Molecular Functionhydrogen ion transmembrane transporter activity
GO:0000276Cellular Componentmitochondrial proton-transporting ATP synthase complex, coupling factor F(o)

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms128.940
SRR2545915Juvenile tuber136.570
SRP108465SRR5643513five period of Gastrodia elata154.750
SRR5643514five period of Gastrodia elata220.660
SRR5643515five period of Gastrodia elata171.520
SRR5643524five period of Gastrodia elata189.530
SRR5643525five period of Gastrodia elata106.470
SRR5643528five period of Gastrodia elata130.000
SRR5643658five period of Gastrodia elata72.090
SRR5643659five period of Gastrodia elata159.800
SRR5643660five period of Gastrodia elata161.160
SRR5643661five period of Gastrodia elata179.040
SRR5643662five period of Gastrodia elata168.600
SRR5643663five period of Gastrodia elata173.810
SRR5643664five period of Gastrodia elata167.870
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1146.470
SRR6049655Rhizomagastrodiae_C368-T10_good_1271.310
SRR6049656Rhizomagastrodiae_C368-T07_good_1169.630
SRR6049657Rhizomagastrodiae_C368-T07_good_1103.380
SRR6049658Rhizomagastrodiae_C368-T04_good_1116.270
SRR6049659Rhizomagastrodiae_C368-T04_good_1112.700
SRR6049660Rhizomagastrodiae_C368-T01_good_1116.980
SRR6049661Rhizomagastrodiae_C368-T04_good_1108.140
SRR6049662Rhizomagastrodiae_C368-T01_good_1168.630
SRR6049663Rhizomagastrodiae_C368-T01_good_1158.620
SRR6049664Rhizomagastrodiae_C368-T10_good_1239.730
SRR6049665Rhizomagastrodiae_C368-T10_good_1239.730
SRP279888GastroGastrodia elata tuber 184.62
JuvenJuvenile tuber136.03
Mother_GastroMother tuber of Gastrodia elata 91.93
Mother_JuvenMother tuber of Juvenile 104.78