Detail information of GWHGAAEX002976/evm.TU.scaffold_129.25


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG28847.00E-15426S proteasome regulatory complex, subunit RPN10/PSMD4
nrgi|743779368|ref|XP_010920149.1|0PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog [Elaeis guineensis]
Swissprottr|P55034|PSMD4_ARATH2.00E-15426S proteasome non-ATPase regulatory subunit 4 homolog
trEMBLtr|I1JCF9|I1JCF9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G05250.1}
TAIRAT4G386307.00E-154regulatory particle non-ATPase 10

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000132704397732107+
Transcript Sequence

Network for GWHGAAEX002976

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13519.5VWA_261159.20E-27
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03029PSMD4, RPN10 Proteasome map03050

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms135.800
SRR2545915Juvenile tuber128.320
SRP108465SRR5643513five period of Gastrodia elata97.240
SRR5643514five period of Gastrodia elata91.150
SRR5643515five period of Gastrodia elata95.960
SRR5643524five period of Gastrodia elata97.700
SRR5643525five period of Gastrodia elata105.390
SRR5643528five period of Gastrodia elata134.480
SRR5643658five period of Gastrodia elata148.540
SRR5643659five period of Gastrodia elata96.820
SRR5643660five period of Gastrodia elata111.010
SRR5643661five period of Gastrodia elata101.540
SRR5643662five period of Gastrodia elata119.020
SRR5643663five period of Gastrodia elata116.550
SRR5643664five period of Gastrodia elata131.610
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1101.330
SRR6049655Rhizomagastrodiae_C368-T10_good_174.600
SRR6049656Rhizomagastrodiae_C368-T07_good_190.460
SRR6049657Rhizomagastrodiae_C368-T07_good_1125.790
SRR6049658Rhizomagastrodiae_C368-T04_good_199.630
SRR6049659Rhizomagastrodiae_C368-T04_good_1115.160
SRR6049660Rhizomagastrodiae_C368-T01_good_1105.820
SRR6049661Rhizomagastrodiae_C368-T04_good_1100.500
SRR6049662Rhizomagastrodiae_C368-T01_good_166.710
SRR6049663Rhizomagastrodiae_C368-T01_good_179.050
SRR6049664Rhizomagastrodiae_C368-T10_good_173.680
SRR6049665Rhizomagastrodiae_C368-T10_good_173.680
SRP279888GastroGastrodia elata tuber 147.57
JuvenJuvenile tuber150.79
Mother_GastroMother tuber of Gastrodia elata 99.62
Mother_JuvenMother tuber of Juvenile 149.48